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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1554 1555 1556 1557 1558 1559 1560 1561 1562 ... 1720 1721 » 77851-77900 / 86044 show all
ltrigg-rtg1	SNP	ti	map_l250_m2_e0	homalt	99.6280	99.5426	99.7136	87.3322	1741	8	1741	5	5	100.0000
jpowers-varprowl	SNP	ti	segdup	homalt	99.6282	99.9600	99.2985	89.1736	7502	3	7502	53	36	67.9245
ckim-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.6282	99.6296	99.6269	64.6904	269	1	267	1	0	0.0000
cchapple-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.6282	99.2848	99.9740	70.9201	3887	28	3839	1	1	100.0000
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.6283	99.2593	100.0000	60.5341	268	2	266	0	0
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.6283	99.2593	100.0000	59.6970	268	2	266	0	0
eyeh-varpipe	SNP	ti	*	het	99.6284	99.9615	99.2976	20.5443	1281404	493	1264336	8944	171	1.9119
ckim-dragen	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.6285	99.8409	99.4171	72.8645	1883	3	1876	11	8	72.7273
raldana-dualsentieon	INDEL	I1_5	map_siren	homalt	99.6286	99.5050	99.7525	77.1148	1206	6	1209	3	2	66.6667
qzeng-custom	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6287	99.3874	99.8711	62.1463	6976	43	6975	9	0	0.0000
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.6287	99.4366	99.8215	36.6123	6707	38	6709	12	10	83.3333
ckim-dragen	SNP	ti	map_l100_m1_e0	homalt	99.6288	99.3708	99.8881	54.6776	17847	113	17852	20	19	95.0000
rpoplin-dv42	SNP	*	map_l100_m1_e0	homalt	99.6291	99.4667	99.7919	61.1512	26859	144	26860	56	52	92.8571
jlack-gatk	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	*	99.6292	99.7696	99.4893	34.4273	3897	9	3896	20	3	15.0000
qzeng-custom	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6297	99.6336	99.6257	58.2037	20125	74	19963	75	44	58.6667
dgrover-gatk	INDEL	I1_5	map_siren	homalt	99.6298	99.7525	99.5074	78.6951	1209	3	1212	6	4	66.6667
hfeng-pmm1	INDEL	I1_5	map_siren	homalt	99.6300	99.8350	99.4258	77.3924	1210	2	1212	7	4	57.1429
jli-custom	INDEL	I1_5	*	het	99.6300	99.4800	99.7804	58.4682	78630	411	78600	173	112	64.7399
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.6300	99.3177	99.9443	71.5425	5386	37	5386	3	3	100.0000
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.6300	99.3177	99.9443	71.5425	5386	37	5386	3	3	100.0000
astatham-gatk	SNP	ti	map_l100_m2_e0	homalt	99.6302	99.3391	99.9231	59.5727	18188	121	18188	14	13	92.8571
raldana-dualsentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6302	99.4260	99.8353	48.5599	2425	14	2425	4	0	0.0000
jli-custom	INDEL	I1_5	map_l100_m2_e1	homalt	99.6310	100.0000	99.2647	80.8922	540	0	540	4	3	75.0000
hfeng-pmm3	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.6310	99.3209	99.9431	59.6415	1755	12	1755	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.6310	99.3377	99.9260	40.6323	4050	27	4053	3	0	0.0000
astatham-gatk	SNP	ti	map_l100_m2_e1	homalt	99.6312	99.3403	99.9239	59.5512	18372	122	18372	14	13	92.8571
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.6312	99.4020	99.8614	63.7399	2161	13	2161	3	0	0.0000
jli-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6313	99.3464	99.9178	60.7293	1216	8	1216	1	1	100.0000
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.6313	99.3324	99.9319	72.9366	1488	10	1468	1	1	100.0000
ltrigg-rtg1	SNP	*	map_l250_m2_e1	homalt	99.6317	99.5217	99.7419	87.3537	2705	13	2705	7	7	100.0000
bgallagher-sentieon	SNP	tv	map_l150_m1_e0	homalt	99.6318	99.4425	99.8219	68.7396	3924	22	3924	7	5	71.4286
rpoplin-dv42	INDEL	I1_5	*	homalt	99.6318	99.4026	99.8620	52.4571	60067	361	60064	83	77	92.7711
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6319	99.8474	99.4174	58.2620	3925	6	3925	23	2	8.6957
hfeng-pmm2	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.6319	99.3746	99.8906	32.4559	7309	46	7305	8	1	12.5000
rpoplin-dv42	SNP	*	map_l100_m2_e0	homalt	99.6325	99.4768	99.7886	63.6376	27379	144	27380	58	54	93.1034
ckim-dragen	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.6327	99.6337	99.6317	78.3060	544	2	541	2	2	100.0000
jlack-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.6329	99.5598	99.7061	77.3995	1357	6	1357	4	2	50.0000
jli-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6329	99.4764	99.7899	79.2908	950	5	950	2	1	50.0000
cchapple-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6333	99.5812	99.6855	77.3934	951	4	951	3	2	66.6667
qzeng-custom	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.6334	99.4522	99.8153	34.5977	2723	15	2702	5	4	80.0000
dgrover-gatk	SNP	ti	map_l125_m2_e0	homalt	99.6336	99.3573	99.9115	66.1532	11285	73	11285	10	8	80.0000
qzeng-custom	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6338	99.4406	99.8276	58.0012	11022	62	11004	19	1	5.2632
ltrigg-rtg1	SNP	*	map_l250_m1_e0	homalt	99.6340	99.4722	99.7963	86.3079	2450	13	2450	5	5	100.0000
rpoplin-dv42	SNP	*	map_l100_m2_e1	homalt	99.6343	99.4783	99.7907	63.6404	27651	145	27652	58	54	93.1034
egarrison-hhga	SNP	ti	segdup	*	99.6343	99.7134	99.5554	88.9440	19481	56	19481	87	25	28.7356
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6346	99.4826	99.7870	59.5165	16344	85	17330	37	22	59.4595
ltrigg-rtg1	INDEL	*	segdup	homalt	99.6351	99.5833	99.6868	92.9210	956	4	955	3	3	100.0000
hfeng-pmm2	INDEL	*	segdup	homalt	99.6360	99.7917	99.4808	93.2596	958	2	958	5	4	80.0000
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.6360	99.4350	99.8379	27.9708	2464	14	2463	4	0	0.0000
dgrover-gatk	SNP	ti	map_l125_m2_e1	homalt	99.6368	99.3629	99.9122	66.1709	11385	73	11385	10	8	80.0000

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