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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1534 1535 1536 1537 1538 1539 1540 1541 1542 ... 1720 1721 » 76851-76900 / 86044 show all
bgallagher-sentieon	SNP	tv	map_l125_m0_e0	homalt	99.5036	99.2796	99.7286	68.6827	2205	16	2205	6	4	66.6667
hfeng-pmm2	SNP	*	map_l250_m2_e1	homalt	99.5040	99.6321	99.3761	87.9531	2708	10	2708	17	6	35.2941
ckim-gatk	SNP	tv	segdup	homalt	99.5043	99.1970	99.8135	89.9144	3212	26	3212	6	6	100.0000
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.5044	99.4538	99.5551	80.0137	10742	59	10742	48	17	35.4167
jmaeng-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.5044	99.0738	99.9389	63.8841	11445	107	11445	7	7	100.0000
jmaeng-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5044	99.0738	99.9389	63.8841	11445	107	11445	7	7	100.0000
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.5045	99.0138	100.0000	86.4030	502	5	502	0	0
ltrigg-rtg2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.5046	99.0824	99.9304	64.6956	11446	106	11491	8	6	75.0000
ltrigg-rtg2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5046	99.0824	99.9304	64.6956	11446	106	11491	8	6	75.0000
jli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.5047	99.5794	99.4300	77.4061	6629	28	6629	38	7	18.4211
rpoplin-dv42	INDEL	I1_5	map_siren	homalt	99.5047	99.4224	99.5871	77.9738	1205	7	1206	5	3	60.0000
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.5047	99.0504	99.9631	30.7908	2712	26	2712	1	1	100.0000
hfeng-pmm2	SNP	tv	map_l125_m0_e0	homalt	99.5050	99.5498	99.4602	72.5691	2211	10	2211	12	4	33.3333
hfeng-pmm1	SNP	tv	map_l125_m0_e0	homalt	99.5050	99.5498	99.4602	72.4501	2211	10	2211	12	4	33.3333
gduggal-bwafb	SNP	ti	map_l125_m2_e1	homalt	99.5050	99.1272	99.8857	70.0171	11358	100	11358	13	7	53.8462
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.5051	99.6037	99.4067	88.7962	1508	6	1508	9	9	100.0000
jmaeng-gatk	INDEL	I1_5	map_siren	homalt	99.5051	99.4224	99.5878	78.4891	1205	7	1208	5	4	80.0000
hfeng-pmm1	INDEL	D1_5	*	*	99.5052	99.1482	99.8648	57.2252	145495	1250	145547	197	112	56.8528
ckim-gatk	INDEL	I1_5	map_siren	homalt	99.5056	99.5050	99.5062	78.6204	1206	6	1209	6	4	66.6667
ltrigg-rtg1	SNP	ti	map_siren	*	99.5060	99.2556	99.7576	49.1435	99607	747	99601	242	38	15.7025
rpoplin-dv42	SNP	*	map_l125_m2_e0	homalt	99.5066	99.2403	99.7743	69.1861	17243	132	17243	39	38	97.4359
ckim-vqsr	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.5068	99.4678	99.5459	59.1769	17756	95	17755	81	6	7.4074
ckim-vqsr	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5070	99.8586	99.1578	72.7530	3532	5	3532	30	30	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5071	99.8869	99.1302	72.8167	3533	4	3533	31	31	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5071	99.8869	99.1302	72.7419	3533	4	3533	31	31	100.0000
qzeng-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.5072	99.1591	99.8579	31.1980	1415	12	1405	2	2	100.0000
raldana-dualsentieon	INDEL	I1_5	*	het	99.5073	99.2827	99.7331	57.9285	78474	567	78457	210	142	67.6190
cchapple-custom	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.5073	99.5362	99.4784	36.9220	3434	16	3433	18	5	27.7778
ghariani-varprowl	SNP	ti	func_cds	het	99.5080	99.8942	99.1249	31.7349	8495	9	8495	75	2	2.6667
jlack-gatk	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.5082	99.1830	99.8355	58.4841	1214	10	1214	2	2	100.0000
jlack-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.5086	99.8706	99.1491	56.7671	6176	8	6176	53	2	3.7736
ltrigg-rtg1	INDEL	D1_5	map_l100_m2_e0	homalt	99.5087	99.3453	99.6727	80.7741	607	4	609	2	2	100.0000
astatham-gatk	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.5088	99.0743	99.9471	55.8025	17018	159	17015	9	6	66.6667
astatham-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.5090	99.5090	99.5090	83.7888	608	3	608	3	2	66.6667
cchapple-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5093	99.4855	99.5331	74.9202	2127	11	2345	11	9	81.8182
ckim-gatk	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.5094	99.6893	99.3302	65.3964	27592	86	27582	186	18	9.6774
rpoplin-dv42	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.5094	99.3762	99.6429	67.2531	6691	42	6696	24	19	79.1667
bgallagher-sentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5095	99.8906	99.1314	69.3307	913	1	913	8	0	0.0000
jli-custom	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.5097	99.6726	99.3473	37.7178	2131	7	2131	14	2	14.2857
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5098	99.3105	99.7100	37.0828	10658	74	10658	31	2	6.4516
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.5100	99.6190	99.4012	66.6667	523	2	498	3	0	0.0000
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.5100	99.3604	99.6600	70.5987	2641	17	2638	9	2	22.2222
hfeng-pmm3	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5101	99.0249	100.0000	30.0763	914	9	916	0	0
ltrigg-rtg1	INDEL	I1_5	HG002complexvar	homalt	99.5102	99.1299	99.8933	45.8849	13330	117	13110	14	9	64.2857
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.5103	99.5446	99.4760	35.3827	7214	33	7214	38	38	100.0000
dgrover-gatk	SNP	*	map_l150_m1_e0	homalt	99.5103	99.1484	99.8749	68.8906	11177	96	11177	14	10	71.4286
bgallagher-sentieon	SNP	ti	segdup	*	99.5103	99.8567	99.1663	89.5899	19509	28	19507	164	6	3.6585
qzeng-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.5105	99.3794	99.6419	52.1832	1121	7	1113	4	2	50.0000
ltrigg-rtg2	INDEL	I1_5	*	het	99.5106	99.4497	99.5716	56.0879	78606	435	77868	335	92	27.4627
rpoplin-dv42	SNP	*	map_l125_m2_e1	homalt	99.5110	99.2471	99.7764	69.2363	17400	132	17400	39	38	97.4359

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