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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1532 1533 1534 1535 1536 1537 1538 1539 1540 ... 1720 1721 » 76751-76800 / 86044 show all
hfeng-pmm1	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.4888	99.0901	99.8907	31.1720	4574	42	4570	5	0	0.0000
hfeng-pmm1	SNP	tv	map_l125_m2_e1	*	99.4888	99.3156	99.6626	71.0607	16543	114	16541	56	16	28.5714
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	99.4888	99.5012	99.4764	82.1911	399	2	380	2	1	50.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.4891	99.5708	99.4077	75.9619	21805	94	21817	130	120	92.3077
asubramanian-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4893	99.5283	99.4503	51.6973	2532	12	2533	14	1	7.1429
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4894	99.5224	99.4565	52.2754	6043	29	6039	33	33	100.0000
astatham-gatk	INDEL	D6_15	HG002complexvar	homalt	99.4894	100.0000	98.9839	62.9548	1169	0	1169	12	12	100.0000
raldana-dualsentieon	INDEL	D6_15	HG002complexvar	homalt	99.4894	100.0000	98.9839	62.5911	1169	0	1169	12	12	100.0000
egarrison-hhga	SNP	tv	map_siren	het	99.4896	99.1331	99.8486	55.6665	28361	248	28361	43	15	34.8837
hfeng-pmm3	SNP	ti	map_l150_m1_e0	*	99.4898	99.4217	99.5579	74.0428	19598	114	19594	87	14	16.0920
ltrigg-rtg1	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.4898	99.2366	99.7443	67.0997	3510	27	3511	9	6	66.6667
raldana-dualsentieon	SNP	ti	map_l250_m2_e1	homalt	99.4901	99.0971	99.8862	85.3999	1756	16	1756	2	1	50.0000
jlack-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.4903	99.4178	99.5630	74.2111	1366	8	1367	6	0	0.0000
hfeng-pmm2	SNP	tv	map_l100_m2_e1	*	99.4903	99.6045	99.3764	68.9155	25183	100	25179	158	17	10.7595
ckim-dragen	SNP	*	map_l100_m0_e0	homalt	99.4909	99.2169	99.7664	57.4442	11529	91	11532	27	24	88.8889
ltrigg-rtg2	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.4910	99.5737	99.4084	59.3516	27560	118	27559	164	14	8.5366
gduggal-snapfb	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.4911	99.5894	99.3930	57.8569	6063	25	6059	37	15	40.5405
jlack-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4911	99.8188	99.1656	57.1479	6061	11	6061	51	49	96.0784
raldana-dualsentieon	SNP	ti	map_l150_m0_e0	homalt	99.4913	99.1670	99.8177	71.1111	2738	23	2738	5	4	80.0000
ckim-dragen	SNP	*	map_l150_m2_e1	homalt	99.4914	99.2221	99.7621	68.4589	11735	92	11740	28	25	89.2857
hfeng-pmm2	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.4917	99.0340	99.9536	62.8172	2153	21	2153	1	0	0.0000
ndellapenna-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4917	99.6183	99.3655	63.7701	783	3	783	5	3	60.0000
astatham-gatk	SNP	ti	map_l125_m2_e1	homalt	99.4917	99.0836	99.9032	65.8143	11353	105	11353	11	10	90.9091
egarrison-hhga	SNP	*	segdup	het	99.4921	99.5438	99.4404	89.6178	17238	79	17238	97	4	4.1237
jlack-gatk	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	het	99.4922	99.5870	99.3976	71.7079	3135	13	3135	19	9	47.3684
gduggal-bwafb	SNP	*	map_l125_m1_e0	homalt	99.4923	99.1127	99.8748	68.0895	16755	150	16755	21	13	61.9048
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.4924	99.3915	99.5935	55.2320	490	3	490	2	0	0.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.4924	99.4924	99.4924	60.6000	196	1	196	1	1	100.0000
hfeng-pmm2	INDEL	D1_5	*	*	99.4930	99.1557	99.8326	57.8117	145506	1239	145558	244	146	59.8361
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.4931	99.5753	99.4111	78.7569	4220	18	4220	25	5	20.0000
astatham-gatk	INDEL	D1_5	map_l100_m1_e0	homalt	99.4932	99.4932	99.4932	83.1098	589	3	589	3	2	66.6667
hfeng-pmm2	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.4932	99.8351	99.1537	57.8723	3632	6	3632	31	29	93.5484
ckim-dragen	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.4934	99.5943	99.3927	58.8676	491	2	491	3	0	0.0000
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.4934	99.9080	99.0821	64.7126	2172	2	2159	20	1	5.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.4934	99.5943	99.3927	55.2131	491	2	491	3	0	0.0000
jli-custom	INDEL	D1_5	segdup	het	99.4935	99.4220	99.5652	94.2192	688	4	687	3	0	0.0000
rpoplin-dv42	INDEL	D1_5	segdup	het	99.4935	99.2775	99.7106	94.2248	687	5	689	2	2	100.0000
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4939	99.2069	99.7825	64.6320	1376	11	1376	3	0	0.0000
jmaeng-gatk	INDEL	D1_5	*	het	99.4941	99.6997	99.2893	60.9724	87311	263	87316	625	129	20.6400
jli-custom	INDEL	I1_5	*	*	99.4941	99.2055	99.7844	57.0293	149467	1197	149502	323	257	79.5666
dgrover-gatk	INDEL	D1_5	segdup	het	99.4942	99.4220	99.5665	95.0932	688	4	689	3	0	0.0000
ckim-dragen	SNP	*	map_l150_m2_e0	homalt	99.4944	99.2307	99.7595	68.4345	11609	90	11614	28	25	89.2857
gduggal-bwafb	SNP	*	map_l125_m2_e0	homalt	99.4945	99.1137	99.8782	70.3251	17221	154	17221	21	13	61.9048
qzeng-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.4948	99.6956	99.2948	79.7023	655	2	704	5	3	60.0000
bgallagher-sentieon	INDEL	D1_5	segdup	het	99.4950	99.5665	99.4236	94.8997	689	3	690	4	0	0.0000
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4951	99.4232	99.5671	63.4301	1379	8	1380	6	2	33.3333
egarrison-hhga	SNP	tv	map_l100_m2_e0	*	99.4951	99.1851	99.8071	65.1309	24829	204	24829	48	19	39.5833
egarrison-hhga	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	*	99.4954	99.2083	99.7842	37.6168	7393	59	7397	16	10	62.5000
bgallagher-sentieon	INDEL	*	HG002complexvar	*	99.4954	99.3774	99.6137	58.2041	76459	479	76328	296	257	86.8243
gduggal-bwafb	SNP	ti	map_l125_m1_e0	homalt	99.4956	99.1127	99.8814	67.6839	10947	98	10947	13	7	53.8462

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