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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1498 1499 1500 1501 1502 1503 1504 1505 1506 ... 1720 1721 » 75051-75100 / 86044 show all
gduggal-bwafb	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.2808	98.8889	99.6759	57.1851	27946	314	27984	91	76	83.5165
dgrover-gatk	SNP	tv	map_l150_m0_e0	homalt	99.2811	98.7952	99.7719	75.6572	1312	16	1312	3	2	66.6667
jli-custom	SNP	*	map_l100_m1_e0	het	99.2812	99.1159	99.4470	63.0672	44958	401	44955	250	62	24.8000
gduggal-bwafb	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.2813	99.8597	98.7097	43.7241	2135	3	2142	28	3	10.7143
hfeng-pmm3	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.2813	99.1758	99.3872	70.5555	3730	31	3730	23	22	95.6522
hfeng-pmm3	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.2813	99.1758	99.3872	70.5555	3730	31	3730	23	22	95.6522
bgallagher-sentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.2817	99.2817	99.2817	83.4450	2626	19	2626	19	6	31.5789
egarrison-hhga	SNP	tv	map_l150_m1_e0	*	99.2818	98.8087	99.7594	72.5943	10782	130	10782	26	12	46.1538
ltrigg-rtg1	INDEL	D1_5	*	*	99.2818	98.7945	99.7740	55.6693	144976	1769	144802	328	127	38.7195
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.2822	99.3573	99.2072	83.9930	2628	17	2628	21	7	33.3333
jli-custom	SNP	*	map_l100_m2_e0	het	99.2823	99.1336	99.4314	64.8428	45997	402	45994	263	62	23.5741
asubramanian-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.2824	98.8813	99.6867	44.4483	1591	18	1591	5	1	20.0000
ckim-gatk	INDEL	D1_5	map_l125_m1_e0	homalt	99.2826	99.1404	99.4253	85.7785	346	3	346	2	2	100.0000
jli-custom	INDEL	D1_5	map_l125_m1_e0	homalt	99.2826	99.1404	99.4253	84.3102	346	3	346	2	2	100.0000
egarrison-hhga	INDEL	D1_5	map_l125_m1_e0	homalt	99.2826	99.1404	99.4253	85.5781	346	3	346	2	2	100.0000
ckim-vqsr	INDEL	D1_5	map_l125_m1_e0	homalt	99.2826	99.1404	99.4253	85.7785	346	3	346	2	2	100.0000
eyeh-varpipe	INDEL	I1_5	map_l150_m1_e0	homalt	99.2826	99.4949	99.0712	87.5674	197	1	320	3	3	100.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.2827	98.9017	99.6667	74.9583	3872	43	3887	13	6	46.1538
ndellapenna-hhga	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2827	98.8697	99.6991	37.4429	4636	53	4639	14	4	28.5714
rpoplin-dv42	SNP	tv	map_l150_m2_e1	homalt	99.2828	98.7905	99.7801	74.0325	4084	50	4084	9	9	100.0000
qzeng-custom	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.2828	99.0685	99.4980	45.3418	4573	43	4559	23	2	8.6957
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.2829	99.3333	99.2326	76.5804	2980	20	2974	23	8	34.7826
bgallagher-sentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2834	99.8869	98.6872	72.6216	3533	4	3533	47	47	100.0000
cchapple-custom	INDEL	I1_5	*	het	99.2835	98.8171	99.7543	58.7353	78106	935	89725	221	127	57.4661
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2837	98.7939	99.7785	64.4068	901	11	901	2	1	50.0000
ckim-dragen	SNP	tv	map_l150_m0_e0	homalt	99.2838	99.1717	99.3962	72.8817	1317	11	1317	8	6	75.0000
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.2840	98.5782	100.0000	47.6071	208	3	208	0	0
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.2840	98.5782	100.0000	47.3418	208	3	208	0	0
ckim-vqsr	INDEL	I1_5	map_l100_m0_e0	homalt	99.2840	100.0000	98.5782	81.2278	208	0	208	3	2	66.6667
dgrover-gatk	INDEL	I1_5	map_siren	*	99.2843	99.1348	99.4343	81.3909	2979	26	2988	17	5	29.4118
ciseli-custom	SNP	*	func_cds	homalt	99.2844	99.8567	98.7187	22.2148	6969	10	6934	90	38	42.2222
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.2844	98.6527	99.9242	48.8561	1318	18	1318	1	0	0.0000
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.2844	98.6527	99.9242	46.2291	1318	18	1318	1	0	0.0000
hfeng-pmm2	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.2845	98.6871	99.8893	67.1756	902	12	902	1	0	0.0000
eyeh-varpipe	INDEL	D1_5	segdup	het	99.2846	99.1329	99.4366	93.3025	686	6	706	4	0	0.0000
ltrigg-rtg1	INDEL	D1_5	*	het	99.2847	98.8627	99.7103	52.7629	86578	996	86378	251	52	20.7171
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	het	99.2848	99.4427	99.1274	50.6623	10349	58	10338	91	83	91.2088
bgallagher-sentieon	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.2848	99.0764	99.4941	66.4545	4720	44	4720	24	5	20.8333
eyeh-varpipe	SNP	ti	func_cds	*	99.2850	99.9637	98.6154	24.7463	13782	5	13675	192	1	0.5208
dgrover-gatk	SNP	ti	map_l100_m0_e0	*	99.2854	99.2467	99.3242	70.6721	21607	164	21604	147	34	23.1293
asubramanian-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.2861	98.8357	99.7406	78.6722	764	9	769	2	0	0.0000
hfeng-pmm2	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	*	99.2862	98.9399	99.6350	37.4196	7373	79	7370	27	2	7.4074
asubramanian-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.2864	98.6702	99.9102	42.2199	1113	15	1113	1	1	100.0000
ckim-vqsr	SNP	*	*	*	99.2866	98.6511	99.9303	23.6837	3013415	41204	3013272	2101	144	6.8539
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.2867	99.8758	98.7045	36.9692	7238	9	7238	95	94	98.9474
jlack-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.2867	99.0043	99.5708	47.6796	696	7	696	3	2	66.6667
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.2867	99.8758	98.7045	36.9692	7238	9	7238	95	94	98.9474
hfeng-pmm1	SNP	tv	map_l125_m1_e0	het	99.2869	99.0026	99.5728	70.2971	10025	101	10023	43	11	25.5814
bgallagher-sentieon	SNP	*	map_l250_m1_e0	homalt	99.2870	98.9444	99.6321	85.1090	2437	26	2437	9	7	77.7778
astatham-gatk	INDEL	*	map_l100_m2_e0	homalt	99.2874	99.4449	99.1304	84.8358	1254	7	1254	11	6	54.5455

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