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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1482 1483 1484 1485 1486 1487 1488 1489 1490 ... 1720 1721 » 74251-74300 / 86044 show all
ltrigg-rtg2	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1654	99.5545	98.7794	37.2444	18102	81	18127	224	7	3.1250
ltrigg-rtg1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.1659	98.8920	99.4413	56.2882	357	4	356	2	2	100.0000
asubramanian-gatk	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.1659	98.5874	99.7512	54.8686	6002	86	6015	15	3	20.0000
jli-custom	SNP	*	map_l100_m0_e0	*	99.1662	98.8612	99.4730	63.5990	32467	374	32467	172	59	34.3023
rpoplin-dv42	SNP	ti	map_l125_m2_e0	het	99.1665	98.9669	99.3669	71.7774	18681	195	18677	119	74	62.1849
asubramanian-gatk	INDEL	*	segdup	homalt	99.1667	99.1667	99.1667	93.6609	952	8	952	8	7	87.5000
jlack-gatk	INDEL	D1_5	map_l150_m2_e0	homalt	99.1667	98.3471	100.0000	87.4803	238	4	238	0	0
hfeng-pmm2	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.1667	98.3471	100.0000	68.1758	238	4	239	0	0
bgallagher-sentieon	INDEL	I1_5	segdup	het	99.1669	99.4424	98.8930	95.2746	535	3	536	6	0	0.0000
ckim-gatk	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.1672	98.9840	99.3511	65.9333	3215	33	3215	21	8	38.0952
jlack-gatk	INDEL	I1_5	map_l100_m2_e1	homalt	99.1674	99.2593	99.0758	82.1511	536	4	536	5	3	60.0000
asubramanian-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.1674	98.6667	99.6732	58.9400	1036	14	1220	4	4	100.0000
egarrison-hhga	INDEL	I1_5	map_l100_m2_e1	homalt	99.1674	99.2593	99.0758	83.1779	536	4	536	5	2	40.0000
ghariani-varprowl	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.1675	99.9091	98.4368	44.5929	2199	2	2204	35	13	37.1429
astatham-gatk	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.1675	99.0429	99.2924	73.5960	93545	904	93452	666	582	87.3874
ckim-gatk	INDEL	*	map_l100_m2_e0	homalt	99.1677	99.2070	99.1284	85.1721	1251	10	1251	11	6	54.5455
mlin-fermikit	SNP	tv	func_cds	het	99.1679	98.6827	99.6579	21.9982	2622	35	2622	9	0	0.0000
dgrover-gatk	SNP	*	map_l150_m2_e0	*	99.1679	99.1680	99.1679	78.4218	31587	265	31581	265	60	22.6415
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.1682	99.4444	98.8935	86.9353	716	4	715	8	7	87.5000
ndellapenna-hhga	INDEL	*	segdup	homalt	99.1684	99.3750	98.9627	93.3714	954	6	954	10	9	90.0000
ndellapenna-hhga	SNP	*	map_l125_m1_e0	*	99.1686	98.5527	99.7922	67.5463	44671	656	44671	93	49	52.6882
qzeng-custom	INDEL	I1_5	segdup	homalt	99.1688	99.7886	98.5567	91.3377	472	1	478	7	6	85.7143
ltrigg-rtg1	SNP	tv	map_siren	het	99.1688	98.8255	99.5144	50.4058	28273	336	28278	138	6	4.3478
ltrigg-rtg2	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.1689	98.4332	99.9157	48.1800	3581	57	3556	3	2	66.6667
jli-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.1690	99.0514	99.2868	87.9764	1253	12	1253	9	4	44.4444
ltrigg-rtg1	INDEL	*	map_l150_m2_e0	homalt	99.1690	99.3763	98.9627	88.0782	478	3	477	5	3	60.0000
mlin-fermikit	INDEL	I1_5	func_cds	*	99.1690	99.4444	98.8950	25.5144	179	1	179	2	1	50.0000
ckim-gatk	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.1690	98.9505	99.3886	67.1606	4714	50	4714	29	10	34.4828
hfeng-pmm2	INDEL	*	map_l100_m2_e0	homalt	99.1690	99.3656	98.9731	82.9472	1253	8	1253	13	6	46.1538
jmaeng-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.1693	98.8590	99.4815	88.1277	2686	31	2686	14	11	78.5714
bgallagher-sentieon	INDEL	*	map_l100_m2_e0	homalt	99.1696	99.4449	98.8959	84.6359	1254	7	1254	14	6	42.8571
hfeng-pmm3	SNP	tv	map_l125_m0_e0	*	99.1700	99.1102	99.2298	75.2152	6572	59	6571	51	7	13.7255
jli-custom	INDEL	D1_5	map_l150_m2_e0	homalt	99.1701	98.7603	99.5833	87.3284	239	3	239	1	1	100.0000
hfeng-pmm3	INDEL	D1_5	map_l150_m2_e0	homalt	99.1701	98.7603	99.5833	85.9155	239	3	239	1	1	100.0000
ckim-vqsr	INDEL	D1_5	map_l150_m2_e0	homalt	99.1701	98.7603	99.5833	88.7006	239	3	239	1	1	100.0000
ckim-gatk	INDEL	D1_5	map_l150_m2_e0	homalt	99.1701	98.7603	99.5833	88.7006	239	3	239	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l150_m2_e0	homalt	99.1701	98.7603	99.5833	86.5697	239	3	239	1	1	100.0000
rpoplin-dv42	SNP	ti	map_l125_m2_e1	het	99.1705	98.9679	99.3738	71.8144	18890	197	18886	119	74	62.1849
bgallagher-sentieon	INDEL	D1_5	map_siren	het	99.1706	99.6047	98.7402	81.3769	2268	9	2273	29	2	6.8966
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.1706	98.8297	99.5138	43.4464	2449	29	2456	12	0	0.0000
jmaeng-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1711	98.8017	99.5433	59.8357	19624	238	19617	90	58	64.4444
hfeng-pmm3	SNP	ti	map_l250_m2_e0	*	99.1712	99.1613	99.1811	88.8122	4966	42	4966	41	5	12.1951
jlack-gatk	INDEL	D1_5	map_l125_m2_e0	homalt	99.1713	98.6264	99.7222	85.0436	359	5	359	1	1	100.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.1713	99.1535	99.1891	87.0415	2694	23	2691	22	15	68.1818
dgrover-gatk	SNP	*	map_l125_m2_e1	het	99.1713	99.3286	99.0144	77.3174	29441	199	29435	293	56	19.1126
bgallagher-sentieon	SNP	tv	map_l125_m2_e0	*	99.1716	99.4784	98.8667	73.4826	16403	86	16401	188	28	14.8936
jli-custom	SNP	*	map_l150_m2_e1	*	99.1717	98.8823	99.4628	73.1735	31850	360	31847	172	59	34.3023
ckim-vqsr	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.1719	98.7467	99.6008	69.5995	1497	19	1497	6	2	33.3333
asubramanian-gatk	INDEL	I1_5	func_cds	*	99.1720	99.4444	98.9011	44.5122	179	1	180	2	0	0.0000
raldana-dualsentieon	INDEL	I1_5	func_cds	*	99.1720	99.4444	98.9011	32.5926	179	1	180	2	0	0.0000

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