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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1471 1472 1473 1474 1475 1476 1477 1478 1479 ... 1720 1721 » 73701-73750 / 86044 show all
ndellapenna-hhga	SNP	*	map_l100_m2_e0	het	99.0800	98.4181	99.7510	64.4052	45665	734	45667	114	41	35.9649
jlack-gatk	SNP	ti	map_l150_m2_e0	homalt	99.0801	98.2931	99.8799	71.3088	7486	130	7486	9	7	77.7778
jli-custom	SNP	*	map_l125_m2_e0	het	99.0801	98.8232	99.3382	70.5778	28973	345	28970	193	54	27.9793
hfeng-pmm2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	99.0802	98.5775	99.5880	67.8801	30700	443	30701	127	3	2.3622
hfeng-pmm2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	99.0802	98.5775	99.5880	67.8801	30700	443	30701	127	3	2.3622
gduggal-snapvard	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.0804	98.3246	99.8480	50.5717	5986	102	5913	9	5	55.5556
bgallagher-sentieon	SNP	ti	map_l250_m0_e0	homalt	99.0805	98.8532	99.3088	90.7522	431	5	431	3	2	66.6667
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.0806	98.1780	100.0000	28.9811	1401	26	1387	0	0
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.0806	99.8938	98.2806	45.8961	10346	11	10346	181	177	97.7901
ltrigg-rtg2	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.0806	98.7622	99.4012	57.1167	1117	14	1162	7	7	100.0000
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.0807	99.5893	98.5772	65.8570	485	2	485	7	7	100.0000
ltrigg-rtg2	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.0810	98.2062	99.9717	26.1765	7117	130	7057	2	2	100.0000
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0811	99.3345	98.8289	41.8039	18062	121	18059	214	2	0.9346
hfeng-pmm1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	99.0815	98.3991	99.7735	47.4300	2643	43	2643	6	0	0.0000
jli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.0815	99.5612	98.6064	70.5927	28586	126	28586	404	25	6.1881
jli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	99.0815	99.5612	98.6064	70.5927	28586	126	28586	404	25	6.1881
jli-custom	SNP	tv	map_l150_m2_e0	*	99.0817	98.8287	99.3360	73.0560	11222	133	11221	75	23	30.6667
asubramanian-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.0819	98.1805	100.0000	72.5000	1349	25	1485	0	0
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.0820	99.9158	98.2619	50.9937	4749	4	4749	84	83	98.8095
ckim-isaac	SNP	tv	func_cds	homalt	99.0820	98.1808	100.0000	21.0849	1673	31	1673	0	0
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.0824	99.5209	98.6478	57.7394	6647	32	6639	91	89	97.8022
gduggal-bwafb	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.0824	98.8212	99.3451	39.8485	3940	47	3944	26	15	57.6923
jmaeng-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.0826	98.7342	99.4334	88.6605	1404	18	1404	8	7	87.5000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.0826	98.6945	99.4737	82.8674	378	5	378	2	1	50.0000
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.0826	100.0000	98.1818	88.6831	108	0	108	2	0	0.0000
ckim-gatk	INDEL	*	func_cds	het	99.0826	100.0000	98.1818	63.4551	214	0	216	4	0	0.0000
raldana-dualsentieon	SNP	*	map_l100_m1_e0	het	99.0827	99.1953	98.9703	66.7199	44994	365	44983	468	7	1.4957
gduggal-bwafb	SNP	tv	map_siren	*	99.0828	99.3686	98.7986	61.3728	45640	290	45640	555	80	14.4144
jlack-gatk	SNP	ti	map_l150_m2_e1	homalt	99.0828	98.2972	99.8811	71.3252	7562	131	7562	9	7	77.7778
ndellapenna-hhga	SNP	*	map_l100_m2_e1	het	99.0834	98.4264	99.7493	64.4229	46160	738	46162	116	41	35.3448
hfeng-pmm3	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.0835	99.3208	98.8474	56.8151	11406	78	11406	133	125	93.9850
hfeng-pmm1	SNP	*	map_l150_m0_e0	*	99.0843	98.9362	99.2329	79.6567	11904	128	11901	92	18	19.5652
gduggal-bwaplat	SNP	ti	*	homalt	99.0843	98.2012	99.9834	17.0820	788593	14445	788346	131	112	85.4962
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.0846	98.4716	99.7052	68.3462	1353	21	1353	4	2	50.0000
rpoplin-dv42	SNP	*	map_l125_m1_e0	het	99.0847	98.9539	99.2159	70.0178	28095	297	28089	222	128	57.6577
hfeng-pmm1	SNP	ti	map_l250_m0_e0	homalt	99.0847	99.3119	98.8584	92.1786	433	3	433	5	2	40.0000
hfeng-pmm2	SNP	ti	map_l250_m0_e0	homalt	99.0847	99.3119	98.8584	92.1786	433	3	433	5	2	40.0000
hfeng-pmm3	SNP	ti	map_l250_m0_e0	homalt	99.0847	99.3119	98.8584	92.1463	433	3	433	5	2	40.0000
dgrover-gatk	SNP	tv	map_l100_m0_e0	*	99.0852	99.1880	98.9825	72.6937	10994	90	10993	113	23	20.3540
jli-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.0852	99.0155	99.1549	88.3559	1408	14	1408	12	6	50.0000
hfeng-pmm3	INDEL	D1_5	map_l100_m2_e0	*	99.0853	98.9034	99.2678	81.4098	1894	21	1898	14	3	21.4286
jlack-gatk	INDEL	I1_5	map_l125_m1_e0	homalt	99.0854	99.3884	98.7842	83.4006	325	2	325	4	2	50.0000
egarrison-hhga	INDEL	I1_5	map_l125_m1_e0	homalt	99.0854	99.3884	98.7842	84.1140	325	2	325	4	1	25.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.0855	99.3885	98.7844	71.5296	3738	23	3738	46	44	95.6522
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.0855	99.3885	98.7844	71.5296	3738	23	3738	46	44	95.6522
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	99.0857	99.0613	99.1102	68.1518	2005	19	2005	18	4	22.2222
gduggal-snapfb	SNP	tv	func_cds	het	99.0857	99.9247	98.2605	37.4682	2655	2	2655	47	0	0.0000
bgallagher-sentieon	SNP	ti	map_l125_m2_e0	het	99.0858	99.3537	98.8194	75.6140	18754	122	18750	224	33	14.7321
jli-custom	INDEL	D16_PLUS	*	homalt	99.0858	99.2908	98.8817	67.1754	1680	12	1680	19	13	68.4211
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0861	98.4860	99.6935	62.3159	1301	20	1301	4	2	50.0000

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