PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
55051-55100 / 86044 show all
rpoplin-dv42INDEL*map_l100_m2_e1hetalt
92.8571
88.6364
97.5000
88.9807
1171511730
0.0000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
92.8571
86.6667
100.0000
96.9412
1321300
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
86.6667
100.0000
84.7059
1321300
qzeng-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
100.0000
86.6667
98.1527
101320
0.0000
rpoplin-dv42INDELI6_15map_l125_m1_e0homalt
92.8571
86.6667
100.0000
91.0959
1321300
rpoplin-dv42INDELI6_15map_l125_m2_e0homalt
92.8571
86.6667
100.0000
92.0732
1321300
rpoplin-dv42INDELI6_15map_l125_m2_e1homalt
92.8571
86.6667
100.0000
92.3977
1321300
mlin-fermikitINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
62.5000
1301322
100.0000
raldana-dualsentieonINDELD16_PLUSmap_l125_m1_e0*
92.8571
96.2963
89.6552
94.5386
2612630
0.0000
raldana-dualsentieonINDELD16_PLUSmap_l125_m2_e0*
92.8571
96.2963
89.6552
95.3451
2612630
0.0000
raldana-dualsentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
57.1429
1301322
100.0000
raldana-dualsentieonINDELD1_5map_l125_m2_e0hetalt
92.8571
86.6667
100.0000
94.7791
1321300
raldana-dualsentieonINDELD1_5map_l125_m2_e1hetalt
92.8571
86.6667
100.0000
94.9219
1321300
raldana-dualsentieonINDELI16_PLUSmap_l125_m1_e0*
92.8571
86.6667
100.0000
93.9815
1321300
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
92.8571
100.0000
86.6667
86.6071
1301321
50.0000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
58.3333
1301322
100.0000
astatham-gatkINDELI1_5map_l250_m0_e0het
92.8571
86.6667
100.0000
98.5507
1321300
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
86.6667
100.0000
89.3443
1321300
gduggal-bwaplatSNPtitech_badpromotershet
92.8571
88.6364
97.5000
65.2174
3953910
0.0000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
92.8571
86.6667
100.0000
96.9838
1321300
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
92.8571
86.6667
100.0000
96.9838
1321300
gduggal-bwaplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
92.8571
86.6667
100.0000
96.9838
1321300
gduggal-bwaplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
92.8571
86.6667
100.0000
96.9838
1321300
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
11.7647
1301322
100.0000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
40.0000
1301322
100.0000
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
92.8571
92.8571
92.8571
99.3463
3933930
0.0000
ckim-dragenINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
92.8571
98.5656
87.7737
71.4137
48174816761
91.0448
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
60.5263
1301322
100.0000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
59.4595
1301322
100.0000
jpowers-varprowlINDELD6_15map_l250_m2_e0het
92.8571
92.8571
92.8571
96.9697
1311311
100.0000
jpowers-varprowlINDELD6_15map_l250_m2_e1het
92.8571
92.8571
92.8571
97.0276
1311311
100.0000
ltrigg-rtg2INDELD16_PLUSmap_l150_m1_e0het
92.8571
92.8571
92.8571
87.0370
1311310
0.0000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
92.8571
100.0000
86.6667
86.3636
1201322
100.0000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
92.8571
100.0000
86.6667
86.3636
1201322
100.0000
ltrigg-rtg2SNPtimap_l150_m1_e0hetalt
92.8571
86.6667
100.0000
61.7647
1321300
ltrigg-rtg2SNPtimap_l150_m2_e0hetalt
92.8571
86.6667
100.0000
69.0476
1321300
ltrigg-rtg2SNPtimap_l150_m2_e1hetalt
92.8571
86.6667
100.0000
69.0476
1321300
ltrigg-rtg1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
92.8571
100.0000
86.6667
87.0690
1201322
100.0000
ltrigg-rtg1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
92.8571
100.0000
86.6667
87.0690
1201322
100.0000
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
92.8571
86.6667
100.0000
95.4225
1321300
jlack-gatkINDELD1_5map_l125_m2_e0hetalt
92.8571
86.6667
100.0000
96.0606
1321300
jlack-gatkINDELD1_5map_l125_m2_e1hetalt
92.8571
86.6667
100.0000
96.1194
1321300
jlack-gatkINDELD6_15segdup*
92.8571
95.2880
90.5473
94.7561
1829182195
26.3158
hfeng-pmm1INDELI1_5map_l250_m0_e0het
92.8571
86.6667
100.0000
98.2527
1321300
hfeng-pmm1INDELI6_15map_l100_m1_e0het
92.8571
88.1356
98.1132
86.2338
5275211
100.0000
hfeng-pmm1SNP*lowcmp_SimpleRepeat_diTR_51to200homalt
92.8571
86.6667
100.0000
96.2428
1321300
jli-customINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
55.8824
1301322
100.0000
jli-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
86.6667
100.0000
84.7059
1321300
jli-customINDELI1_5map_l250_m0_e0het
92.8571
86.6667
100.0000
98.0994
1321300
jli-customINDELI6_15map_l100_m1_e0het
92.8571
88.1356
98.1132
84.9432
5275211
100.0000