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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1045 1046 1047 1048 1049 1050 1051 1052 1053 ... 1720 1721 » 52401-52450 / 86044 show all
gduggal-bwavard	INDEL	*	map_l125_m2_e0	het	90.4577	98.4184	83.6884	91.8376	1369	22	1375	268	70	26.1194
mlin-fermikit	INDEL	D6_15	*	het	90.4589	94.5825	86.6799	51.7766	10964	628	10952	1683	1653	98.2175
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	90.4630	88.1350	92.9173	49.6530	2429	327	2427	185	180	97.2973
eyeh-varpipe	INDEL	D6_15	segdup	het	90.4649	88.0435	93.0233	92.0149	81	11	80	6	6	100.0000
ghariani-varprowl	INDEL	*	map_l100_m2_e0	*	90.4686	92.6889	88.3523	92.4226	3423	270	3421	451	206	45.6763
anovak-vg	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	90.4686	92.4642	88.5573	75.8297	42258	3444	42999	5556	1706	30.7055
anovak-vg	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	90.4686	92.4642	88.5573	75.8297	42258	3444	42999	5556	1706	30.7055
ghariani-varprowl	INDEL	*	map_l100_m2_e1	het	90.4724	98.0794	83.9605	89.9843	2298	45	2298	439	207	47.1526
ckim-dragen	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.4762	82.6087	100.0000	56.3910	57	12	58	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	77.5510	19	4	22	0	0
ckim-gatk	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	95.8515	19	4	19	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	72.5000	19	4	22	0	0
jpowers-varprowl	INDEL	D6_15	map_l250_m2_e0	*	90.4762	86.3636	95.0000	96.3636	19	3	19	1	1	100.0000
jpowers-varprowl	INDEL	D6_15	map_l250_m2_e1	*	90.4762	86.3636	95.0000	96.4349	19	3	19	1	1	100.0000
ltrigg-rtg1	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	96.8750	19	4	20	0	0
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	74.0741	19	4	21	0	0
ltrigg-rtg2	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	97.0501	19	4	20	0	0
jmaeng-gatk	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	95.9831	19	4	19	0	0
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	90.4762	100.0000	82.6087	90.4959	1	0	19	4	3	75.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	90.4762	82.6087	100.0000	77.1084	19	4	19	0	0
ndellapenna-hhga	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	96.2704	19	4	16	0	0
raldana-dualsentieon	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	94.2424	19	4	19	0	0
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	74.3902	19	4	21	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	90.4762	82.6087	100.0000	66.6667	19	4	19	0	0
ckim-vqsr	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	95.8515	19	4	19	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	72.5000	19	4	22	0	0
egarrison-hhga	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	95.8838	19	4	17	0	0
jlack-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	72.1519	19	4	22	0	0
jlack-gatk	INDEL	I16_PLUS	map_siren	homalt	90.4762	90.4762	90.4762	95.1276	19	2	19	2	1	50.0000
jlack-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	90.4762	82.6087	100.0000	13.6364	19	4	19	0	0
jli-custom	INDEL	*	map_l150_m2_e1	hetalt	90.4762	82.6087	100.0000	95.6916	19	4	19	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	90.4762	82.6087	100.0000	76.1364	19	4	21	0	0
jlack-gatk	INDEL	D6_15	map_l150_m1_e0	het	90.4762	97.4359	84.4444	95.1665	38	1	38	7	0	0.0000
ciseli-custom	SNP	*	map_l100_m2_e0	homalt	90.4763	89.7867	91.1766	62.8157	24712	2811	24604	2381	1867	78.4124
mlin-fermikit	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	90.4777	92.0158	88.9901	86.8129	1164	101	1172	145	90	62.0690
jlack-gatk	SNP	tv	map_l125_m0_e0	het	90.4803	98.5003	83.6680	86.8150	4335	66	4334	846	47	5.5556
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	90.4880	83.4521	98.8195	30.8039	11710	2322	12138	145	128	88.2759
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	90.4890	90.6867	90.2922	79.9205	964	99	958	103	83	80.5825
gduggal-snapvard	INDEL	I1_5	map_l125_m2_e1	*	90.4900	94.5977	86.7243	88.6844	823	47	1104	169	71	42.0118
gduggal-bwaplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	90.4913	83.3097	99.0278	77.4266	18244	3655	18233	179	151	84.3575
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.4918	82.6347	100.0000	64.3038	138	29	141	0	0
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.4918	82.6347	100.0000	69.2140	138	29	141	0	0
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.4918	82.6347	100.0000	64.3038	138	29	141	0	0
gduggal-snapfb	INDEL	*	HG002complexvar	*	90.4920	87.9994	93.1300	55.3026	67705	9233	69298	5112	2371	46.3811
asubramanian-gatk	INDEL	*	HG002compoundhet	het	90.4926	96.2872	85.3557	79.1653	3942	152	3707	636	459	72.1698
ghariani-varprowl	INDEL	*	segdup	het	90.4926	98.3629	83.7885	96.1254	1442	24	1442	279	206	73.8351
jlack-gatk	SNP	ti	map_l250_m0_e0	het	90.4950	97.8587	84.1621	96.2262	914	20	914	172	18	10.4651
gduggal-bwavard	INDEL	D1_5	HG002compoundhet	homalt	90.4952	86.5979	94.7598	55.0098	252	39	217	12	12	100.0000
jpowers-varprowl	INDEL	*	func_cds	het	90.4977	93.4579	87.7193	46.9767	200	14	200	28	27	96.4286
jpowers-varprowl	INDEL	I1_5	map_l250_m2_e0	*	90.4977	88.4956	92.5926	96.4167	100	13	100	8	4	50.0000

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