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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1038 1039 1040 1041 1042 1043 1044 1045 1046 ... 1720 1721 » 52051-52100 / 86044 show all
ghariani-varprowl	INDEL	D6_15	tech_badpromoters	het	90.0000	90.0000	90.0000	58.3333	9	1	9	1	1	100.0000
jlack-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.0000	81.8182	100.0000	85.5422	9	2	12	0	0
jlack-gatk	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	97.4359	9	0	9	2	0	0.0000
jlack-gatk	INDEL	D6_15	map_l125_m0_e0	*	90.0000	95.7447	84.9057	94.0382	45	2	45	8	0	0.0000
hfeng-pmm2	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	96.1404	9	0	9	2	0	0.0000
hfeng-pmm2	INDEL	D16_PLUS	map_l125_m2_e1	*	90.0000	96.4286	84.3750	96.2963	27	1	27	5	0	0.0000
hfeng-pmm1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	90.0000	82.8947	98.4375	90.7581	126	26	126	2	0	0.0000
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.0000	81.8182	100.0000	84.4156	9	2	12	0	0
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	95.2174	9	0	9	2	0	0.0000
jlack-gatk	SNP	*	map_l150_m1_e0	hetalt	90.0000	90.0000	90.0000	89.5833	18	2	18	2	2	100.0000
jlack-gatk	SNP	*	map_l150_m2_e0	hetalt	90.0000	90.0000	90.0000	91.0314	18	2	18	2	2	100.0000
jlack-gatk	SNP	*	map_l150_m2_e1	hetalt	90.0000	90.0000	90.0000	91.0314	18	2	18	2	2	100.0000
jlack-gatk	SNP	tv	map_l150_m1_e0	hetalt	90.0000	90.0000	90.0000	89.5833	18	2	18	2	2	100.0000
jlack-gatk	SNP	tv	map_l150_m2_e0	hetalt	90.0000	90.0000	90.0000	91.0314	18	2	18	2	2	100.0000
jlack-gatk	SNP	tv	map_l150_m2_e1	hetalt	90.0000	90.0000	90.0000	91.0314	18	2	18	2	2	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	90.0000	81.8182	100.0000	99.2007	9	2	9	0	0
eyeh-varpipe	INDEL	D1_5	tech_badpromoters	homalt	90.0000	100.0000	81.8182	26.6667	9	0	9	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l250_m0_e0	*	90.0000	97.8261	83.3333	98.2813	45	1	45	9	0	0.0000
ltrigg-rtg2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.0000	81.8182	100.0000	87.8378	9	2	9	0	0
jmaeng-gatk	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	97.5281	9	0	9	2	0	0.0000
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	*	90.0000	100.0000	81.8182	97.2637	9	0	9	2	0	0.0000
jpowers-varprowl	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	98.4743	9	0	9	2	1	50.0000
jpowers-varprowl	INDEL	D6_15	func_cds	het	90.0000	93.1034	87.0968	53.0303	27	2	27	4	4	100.0000
ltrigg-rtg2	INDEL	I6_15	map_l100_m0_e0	*	90.0000	81.8182	100.0000	86.5672	27	6	27	0	0
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	90.0000	81.8182	100.0000	97.4286	36	8	36	0	0
asubramanian-gatk	INDEL	D16_PLUS	map_l125_m1_e0	het	90.0000	90.0000	90.0000	97.3545	18	2	18	2	0	0.0000
bgallagher-sentieon	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	96.7836	9	0	9	2	0	0.0000
astatham-gatk	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	97.0109	9	0	9	2	0	0.0000
ckim-isaac	INDEL	*	tech_badpromoters	homalt	90.0000	81.8182	100.0000	50.9091	27	6	27	0	0
ckim-dragen	INDEL	*	map_l125_m0_e0	hetalt	90.0000	81.8182	100.0000	95.2128	9	2	9	0	0
ckim-gatk	INDEL	D16_PLUS	map_l125_m0_e0	het	90.0000	100.0000	81.8182	97.6596	9	0	9	2	0	0.0000
cchapple-custom	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	90.0000	100.0000	81.8182	96.5692	1	0	72	16	8	50.0000
egarrison-hhga	INDEL	I16_PLUS	*	hetalt	90.0034	83.0315	98.2535	51.8970	1742	356	1744	31	26	83.8710
anovak-vg	SNP	ti	map_l125_m2_e1	homalt	90.0123	82.2569	99.3822	67.2869	9425	2033	9330	58	53	91.3793
asubramanian-gatk	INDEL	D1_5	map_l150_m0_e0	*	90.0178	90.3114	89.7260	93.4821	261	28	262	30	2	6.6667
rpoplin-dv42	INDEL	D16_PLUS	map_siren	het	90.0217	87.1795	93.0556	91.7526	68	10	67	5	3	60.0000
ckim-gatk	INDEL	D6_15	HG002compoundhet	het	90.0227	98.3645	82.9851	68.6916	842	14	834	171	169	98.8304
gduggal-snapfb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	90.0230	88.4886	91.6115	43.8230	6534	850	11631	1065	307	28.8263
ndellapenna-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	90.0232	87.7828	92.3810	89.6907	194	27	194	16	9	56.2500
jmaeng-gatk	SNP	ti	map_l100_m2_e1	*	90.0240	82.8837	98.5106	78.5961	41015	8470	41008	620	64	10.3226
ndellapenna-hhga	INDEL	I16_PLUS	HG002compoundhet	hetalt	90.0250	82.3698	99.2490	40.2898	1724	369	1718	13	9	69.2308
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	90.0260	94.5355	85.9272	79.6359	519	30	519	85	85	100.0000
ltrigg-rtg2	INDEL	D16_PLUS	HG002complexvar	hetalt	90.0287	86.6397	93.6937	56.8932	214	33	208	14	14	100.0000
qzeng-custom	INDEL	I1_5	map_siren	homalt	90.0289	82.9208	98.4698	74.4832	1005	207	1094	17	4	23.5294
gduggal-snapvard	SNP	ti	map_l150_m2_e0	het	90.0316	96.5142	84.3650	84.9671	12432	449	12335	2286	171	7.4803
jpowers-varprowl	INDEL	*	segdup	het	90.0339	94.9523	85.6000	95.0457	1392	74	1391	234	206	88.0342
ltrigg-rtg1	INDEL	*	map_l250_m0_e0	het	90.0391	84.9057	95.8333	93.7173	45	8	46	2	0	0.0000
ckim-gatk	SNP	ti	map_l100_m2_e1	*	90.0482	82.8877	98.5628	78.3843	41017	8468	41010	598	70	11.7057
gduggal-bwaplat	INDEL	I6_15	segdup	*	90.0543	82.8571	98.6207	95.0257	145	30	143	2	2	100.0000
ndellapenna-hhga	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	90.0567	88.9908	91.1483	82.8689	388	48	381	37	24	64.8649

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