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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1032 1033 1034 1035 1036 1037 1038 1039 1040 ... 1720 1721 » 51751-51800 / 86044 show all
raldana-dualsentieon	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	89.6217	88.0000	91.3043	82.5095	44	6	42	4	2	50.0000
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	*	89.6217	88.0000	91.3043	43.9024	22	3	21	2	0	0.0000
asubramanian-gatk	INDEL	*	map_l100_m2_e1	het	89.6239	84.6778	95.1836	90.0945	1984	359	1996	101	13	12.8713
gduggal-bwavard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	89.6250	81.2640	99.9038	61.4872	17796	4103	17660	17	16	94.1176
ckim-gatk	INDEL	D1_5	map_l250_m2_e0	het	89.6296	100.0000	81.2081	97.1866	121	0	121	28	1	3.5714
asubramanian-gatk	INDEL	I1_5	map_l125_m0_e0	het	89.6323	85.4167	94.2857	93.1800	164	28	165	10	0	0.0000
ghariani-varprowl	INDEL	*	*	het	89.6326	98.5731	82.1789	64.2989	191361	2770	191449	41517	38150	91.8901
asubramanian-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	89.6330	82.7586	97.7528	84.0215	72	15	87	2	2	100.0000
anovak-vg	SNP	*	map_l125_m2_e0	homalt	89.6412	81.6863	99.3125	67.9435	14193	3182	14013	97	81	83.5052
asubramanian-gatk	INDEL	*	map_l100_m2_e0	het	89.6413	84.6987	95.1965	90.0770	1954	353	1962	99	13	13.1313
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	89.6438	88.9452	90.3535	42.9428	33712	4190	54335	5801	4069	70.1431
ndellapenna-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	89.6468	92.1537	87.2727	64.8656	1151	98	1152	168	98	58.3333
ndellapenna-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	89.6468	92.1537	87.2727	64.8656	1151	98	1152	168	98	58.3333
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	89.6491	94.3079	85.4289	76.7105	729	44	727	124	122	98.3871
gduggal-snapvard	INDEL	I1_5	map_l100_m2_e1	het	89.6492	98.3951	82.3311	88.9834	797	13	1109	238	111	46.6387
gduggal-bwafb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	89.6510	84.0909	95.9984	54.3693	4958	938	2351	98	96	97.9592
gduggal-bwafb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	89.6510	84.0909	95.9984	54.3693	4958	938	2351	98	96	97.9592
gduggal-bwavard	INDEL	D1_5	map_l150_m2_e1	het	89.6534	98.6590	82.1543	92.0895	515	7	511	111	13	11.7117
gduggal-bwafb	INDEL	D16_PLUS	map_l150_m2_e0	het	89.6552	81.2500	100.0000	85.5556	13	3	13	0	0
gduggal-bwafb	INDEL	D16_PLUS	map_l150_m2_e1	het	89.6552	81.2500	100.0000	85.7143	13	3	13	0	0
gduggal-bwaplat	INDEL	I6_15	func_cds	homalt	89.6552	86.6667	92.8571	39.1304	13	2	13	1	1	100.0000
rpoplin-dv42	INDEL	*	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	89.6552	81.2500	100.0000	99.8895	13	3	13	0	0
rpoplin-dv42	INDEL	I16_PLUS	map_siren	hetalt	89.6552	81.2500	100.0000	79.4118	13	3	14	0	0
raldana-dualsentieon	INDEL	D16_PLUS	map_l150_m1_e0	het	89.6552	92.8571	86.6667	93.4211	13	1	13	2	0	0.0000
raldana-dualsentieon	INDEL	I16_PLUS	map_l125_m2_e0	*	89.6552	86.6667	92.8571	94.6970	13	2	13	1	0	0.0000
raldana-dualsentieon	INDEL	I16_PLUS	map_l125_m2_e1	*	89.6552	86.6667	92.8571	94.7170	13	2	13	1	0	0.0000
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	*	89.6552	81.2500	100.0000	97.7816	13	3	13	0	0
qzeng-custom	INDEL	D6_15	func_cds	homalt	89.6552	100.0000	81.2500	50.0000	12	0	13	3	1	33.3333
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	89.6552	95.1220	84.7826	76.1039	78	4	78	14	14	100.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	89.6552	86.6667	92.8571	96.6746	13	2	13	1	1	100.0000
cchapple-custom	INDEL	D16_PLUS	map_l125_m2_e1	*	89.6552	92.8571	86.6667	95.3125	26	2	26	4	0	0.0000
hfeng-pmm2	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	*	89.6552	81.2500	100.0000	97.7586	13	3	13	0	0
hfeng-pmm3	INDEL	D16_PLUS	map_l100_m0_e0	*	89.6552	92.8571	86.6667	95.1378	26	2	26	4	0	0.0000
jli-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	89.6552	84.7826	95.1220	62.7273	39	7	39	2	2	100.0000
jli-custom	INDEL	I16_PLUS	map_l125_m1_e0	*	89.6552	86.6667	92.8571	95.3642	13	2	13	1	0	0.0000
jlack-gatk	INDEL	I16_PLUS	map_l125_m1_e0	*	89.6552	86.6667	92.8571	97.3231	13	2	13	1	0	0.0000
jlack-gatk	INDEL	I16_PLUS	map_l125_m2_e0	*	89.6552	86.6667	92.8571	97.5986	13	2	13	1	0	0.0000
jlack-gatk	INDEL	I16_PLUS	map_l125_m2_e1	*	89.6552	86.6667	92.8571	97.5986	13	2	13	1	0	0.0000
jlack-gatk	SNP	ti	map_l100_m0_e0	hetalt	89.6552	92.8571	86.6667	82.5581	13	1	13	2	2	100.0000
hfeng-pmm1	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	*	89.6552	81.2500	100.0000	97.7193	13	3	13	0	0
hfeng-pmm3	INDEL	D16_PLUS	map_l150_m1_e0	het	89.6552	92.8571	86.6667	94.4444	13	1	13	2	0	0.0000
hfeng-pmm3	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	*	89.6552	81.2500	100.0000	97.8930	13	3	13	0	0
eyeh-varpipe	INDEL	D6_15	func_cds	het	89.6552	89.6552	89.6552	38.2979	26	3	26	3	3	100.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m0_e0	*	89.6552	92.8571	86.6667	97.1910	26	2	26	4	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m2_e1	*	89.6552	92.8571	86.6667	97.2653	26	2	26	4	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l150_m1_e0	het	89.6552	92.8571	86.6667	96.5675	13	1	13	2	0	0.0000
dgrover-gatk	INDEL	I6_15	map_l150_m1_e0	het	89.6552	86.6667	92.8571	95.5128	13	2	13	1	1	100.0000
dgrover-gatk	INDEL	I6_15	map_l150_m2_e0	het	89.6552	86.6667	92.8571	95.9064	13	2	13	1	1	100.0000
gduggal-snapfb	INDEL	I1_5	map_l250_m1_e0	het	89.6552	86.6667	92.8571	95.7831	52	8	52	4	1	25.0000
asubramanian-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	89.6552	81.2500	100.0000	83.5052	13	3	16	0	0

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