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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 3 4 5 6 ... 1720 1721 » 51-100 / 86044 show all
rpoplin-dv42	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	segdup	homalt	99.8469	99.9067	99.7871	88.5156	7498	7	7498	16	16	100.0000
rpoplin-dv42	SNP	ti	map_siren	homalt	99.8060	99.7283	99.8838	52.4445	37813	103	37814	44	42	95.4545
rpoplin-dv42	SNP	ti	map_l250_m2_e1	homalt	98.9217	98.3634	99.4863	87.6793	1743	29	1743	9	9	100.0000
rpoplin-dv42	SNP	ti	map_l250_m2_e0	homalt	98.9359	98.3419	99.5370	87.6280	1720	29	1720	8	8	100.0000
rpoplin-dv42	SNP	ti	map_l250_m1_e0	homalt	98.8722	98.1954	99.5584	86.5187	1578	29	1578	7	7	100.0000
rpoplin-dv42	SNP	ti	map_l250_m0_e0	homalt	98.4936	97.4771	99.5316	91.1005	425	11	425	2	2	100.0000
rpoplin-dv42	SNP	ti	map_l150_m2_e1	homalt	99.3872	99.0901	99.6862	73.4415	7623	70	7623	24	23	95.8333
rpoplin-dv42	SNP	ti	map_l150_m2_e0	homalt	99.3810	99.0809	99.6830	73.3835	7546	70	7546	24	23	95.8333
rpoplin-dv42	SNP	ti	map_l150_m1_e0	homalt	99.3702	99.0583	99.6841	71.0853	7258	69	7258	23	22	95.6522
rpoplin-dv42	SNP	ti	map_l150_m0_e0	homalt	98.9435	98.3702	99.5236	74.2304	2716	45	2716	13	12	92.3077
rpoplin-dv42	SNP	ti	map_l125_m2_e1	homalt	99.5496	99.3367	99.7633	68.9111	11382	76	11382	27	26	96.2963
rpoplin-dv42	SNP	ti	map_l125_m2_e0	homalt	99.5456	99.3309	99.7613	68.8663	11282	76	11282	27	26	96.2963
rpoplin-dv42	SNP	ti	map_l125_m1_e0	homalt	99.5372	99.3119	99.7635	66.3061	10969	76	10969	26	25	96.1538
rpoplin-dv42	SNP	ti	map_l125_m0_e0	homalt	99.2059	98.7531	99.6629	68.6730	4435	56	4435	15	14	93.3333
rpoplin-dv42	SNP	ti	map_l100_m2_e1	homalt	99.6670	99.5404	99.7940	62.9692	18409	85	18410	38	36	94.7368
rpoplin-dv42	SNP	ti	map_l100_m2_e0	homalt	99.6664	99.5412	99.7919	62.9736	18225	84	18226	38	36	94.7368
rpoplin-dv42	SNP	ti	map_l100_m1_e0	homalt	99.6655	99.5323	99.7990	60.4404	17876	84	17877	36	34	94.4444
rpoplin-dv42	SNP	ti	map_l100_m0_e0	homalt	99.4451	99.1253	99.7670	62.0330	7706	68	7706	18	17	94.4444
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	95.5556	2	0	2	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9299	99.9299	99.9299	28.6857	1426	1	1426	1	1	100.0000
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	100.0000	100.0000	100.0000	92.5156	35	0	36	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9248	99.9248	99.9248	37.2719	3984	3	3984	3	3	100.0000
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9318	99.8637	100.0000	42.6858	2198	3	2198	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	homalt	100.0000	100.0000	100.0000	96.7213	6	0	6	0	0
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7923	99.6445	99.9406	65.1625	1682	6	1682	1	1	100.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.8049	99.6537	99.9566	69.9831	11512	40	11514	5	2	40.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.6890	99.4621	99.9169	79.7698	2404	13	2406	2	1	50.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.0826	98.6945	99.4737	82.8674	378	5	378	2	1	50.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.2090	98.8739	99.5465	84.4225	439	5	439	2	1	50.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	90.5333	69	0	71	0	0
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.7078	99.4172	100.0000	48.8609	853	5	853	0	0
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7607	99.5225	100.0000	46.7518	1459	7	1459	0	0
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8668	99.7340	100.0000	52.3709	1125	3	1125	0	0
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.8049	99.6537	99.9566	69.9831	11512	40	11514	5	2	40.0000
rpoplin-dv42	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8762	99.8119	99.9405	50.3909	10083	19	10083	6	5	83.3333
rpoplin-dv42	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.8773	99.7549	100.0000	64.8765	1221	3	1223	0	0
rpoplin-dv42	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	21.4775	5272	3	5272	0	0
rpoplin-dv42	SNP	ti	decoy	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	ti	HG002compoundhet	homalt	99.7770	99.8377	99.7163	30.8389	7382	12	7382	21	20	95.2381
rpoplin-dv42	SNP	ti	HG002complexvar	homalt	99.9574	99.9530	99.9617	18.4113	193372	91	193367	74	72	97.2973
rpoplin-dv42	SNP	ti	*	homalt	99.9800	99.9747	99.9853	16.8487	802835	203	802832	118	106	89.8305
rpoplin-dv42	SNP	*	tech_badpromoters	homalt	98.7500	98.7500	98.7500	50.9202	79	1	79	1	1	100.0000
rpoplin-dv42	SNP	*	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0

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