PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotype F-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85601-85650 / 86044 show all
ghariani-varprowlINDEL*map_l150_m0_e0*
89.2989
94.1634
84.9123
96.4917
484304848620
23.2558
ghariani-varprowlINDEL*map_l150_m1_e0*
90.8174
94.2451
87.6303
95.0045
126177126117851
28.6517
ghariani-varprowlINDEL*map_l150_m2_e0*
91.0274
94.3892
87.8968
95.3487
132979132918352
28.4153
ghariani-varprowlINDEL*map_l150_m2_e1*
90.7203
94.0931
87.5809
95.3621
135485135419256
29.1667
ghariani-varprowlINDEL*map_l250_m0_e0*
80.6630
93.5897
70.8738
98.9454
73573303
10.0000
ghariani-varprowlINDEL*map_l250_m1_e0*
87.2111
92.7869
82.2674
98.0750
283222836112
19.6721
ghariani-varprowlINDEL*map_l250_m2_e0*
87.7841
93.3535
82.8418
98.1723
309223096412
18.7500
ghariani-varprowlINDEL*map_l250_m2_e1*
87.8531
93.3934
82.9333
98.2167
311223116412
18.7500
ghariani-varprowlINDEL*map_siren*
90.8910
92.7126
89.1397
90.4253
68705406870837449
53.6440
ghariani-varprowlINDEL*segdup*
89.4068
90.3756
88.4586
97.2748
23102462307301223
74.0864
ghariani-varprowlINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9988
10100
ghariani-varprowlINDEL*tech_badpromoters*
78.6667
77.6316
79.7297
67.6856
5917591515
100.0000
ghariani-varprowlINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l100_m0_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l100_m1_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l100_m2_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l100_m2_e1*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m0_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m1_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m2_e0*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_l125_m2_e1*
0.0000
0.0000
0.0000
00000