PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotype F-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
751-800 / 86044 show all
raldana-dualsentieonSNP*map_l100_m2_e0homalt
99.8291
99.7275
99.9308
59.5568
2744875274481915
78.9474
raldana-dualsentieonSNP*map_l100_m1_e0homalt
99.8258
99.7223
99.9295
56.9722
2692875269281915
78.9474
raldana-dualsentieonSNP*map_l100_m0_e0homalt
99.7198
99.5353
99.9050
58.6521
115665411566118
72.7273
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.2264
20200
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_triTR_11to50homalt
99.9452
99.9270
99.9635
30.8140
27362273611
100.0000
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_quadTR_51to200homalt
95.1220
95.1220
95.1220
91.5638
3923921
50.0000
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.9852
99.9852
99.9852
34.3808
67441674411
100.0000
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9507
99.9671
99.9343
54.3615
60862608644
100.0000
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_diTR_51to200homalt
96.5517
93.3333
100.0000
96.0563
1411400
raldana-dualsentieonSNP*lowcmp_SimpleRepeat_diTR_11to50homalt
99.8406
99.7395
99.9420
62.2220
34469344622
100.0000
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.8260
99.7054
99.9469
65.8244
16925501692598
88.8889
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.7826
99.6424
99.9232
75.5082
390114390132
66.6667
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.5294
99.2958
99.7642
84.2672
846684622
100.0000
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.3133
98.8433
99.7877
85.1420
9401194022
100.0000
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
97.2222
95.4545
99.0566
90.3811
105510510
0.0000
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
57.2621
13830138300
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9778
99.9556
100.0000
51.6849
22511225100
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.9067
99.8135
100.0000
43.3110
16063160600
raldana-dualsentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.8260
99.7054
99.9469
65.8244
16925501692598
88.8889
raldana-dualsentieonSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9455
99.9307
99.9604
55.9950
20185142018588
100.0000
raldana-dualsentieonSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.7135
99.5423
99.8852
59.7783
17408174021
50.0000
raldana-dualsentieonSNP*func_cdshomalt
99.9928
99.9857
100.0000
20.6414
69781697800
raldana-dualsentieonSNP*decoyhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNP*HG002compoundhethomalt
99.8887
99.8609
99.9165
34.8192
10767151076898
88.8889
raldana-dualsentieonSNP*HG002complexvarhomalt
99.9794
99.9695
99.9893
19.8637
288486882884713129
93.5484
raldana-dualsentieonSNP**homalt
99.9888
99.9827
99.9949
17.0955
117995720411799436053
88.3333
raldana-dualsentieonINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
raldana-dualsentieonINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonINDELI6_15segduphomalt
97.8261
95.7447
100.0000
91.8330
4524500
raldana-dualsentieonINDELI6_15map_sirenhomalt
96.1749
97.7778
94.6237
82.9044
8828853
60.0000
raldana-dualsentieonINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
96.9231
21200
raldana-dualsentieonINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
96.7213
21200
raldana-dualsentieonINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
96.4286
21200
raldana-dualsentieonINDELI6_15map_l250_m0_e0homalt
0.0000
100.0000
01000
raldana-dualsentieonINDELI6_15map_l150_m2_e1homalt
80.0000
75.0000
85.7143
94.8148
62610
0.0000
raldana-dualsentieonINDELI6_15map_l150_m2_e0homalt
76.9231
71.4286
83.3333
95.3125
52510
0.0000
raldana-dualsentieonINDELI6_15map_l150_m1_e0homalt
76.9231
71.4286
83.3333
94.5946
52510
0.0000
raldana-dualsentieonINDELI6_15map_l150_m0_e0homalt
85.7143
75.0000
100.0000
93.0233
31300
raldana-dualsentieonINDELI6_15map_l125_m2_e1homalt
86.6667
86.6667
86.6667
91.5254
1321320
0.0000
raldana-dualsentieonINDELI6_15map_l125_m2_e0homalt
86.6667
86.6667
86.6667
91.1765
1321320
0.0000
raldana-dualsentieonINDELI6_15map_l125_m1_e0homalt
86.6667
86.6667
86.6667
90.0662
1321320
0.0000
raldana-dualsentieonINDELI6_15map_l125_m0_e0homalt
83.3333
83.3333
83.3333
89.4737
51510
0.0000
raldana-dualsentieonINDELI6_15map_l100_m2_e1homalt
93.9394
93.9394
93.9394
87.3563
3123120
0.0000
raldana-dualsentieonINDELI6_15map_l100_m2_e0homalt
93.9394
93.9394
93.9394
87.0588
3123120
0.0000
raldana-dualsentieonINDELI6_15map_l100_m1_e0homalt
93.9394
93.9394
93.9394
85.8974
3123120
0.0000