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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

1 2 3 4 5 ... 1720 1721 » 1-50 / 86044 show all
rpoplin-dv42	SNP	tv	tech_badpromoters	homalt	98.7013	97.4359	100.0000	55.2941	38	1	38	0	0
rpoplin-dv42	SNP	tv	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	segdup	homalt	99.7378	99.8456	99.6302	90.4939	3233	5	3233	12	12	100.0000
rpoplin-dv42	SNP	tv	map_siren	homalt	99.7328	99.5998	99.8662	55.9755	17171	69	17169	23	21	91.3043
rpoplin-dv42	SNP	tv	map_l250_m2_e1	homalt	98.2869	97.0402	99.5662	88.1078	918	28	918	4	4	100.0000
rpoplin-dv42	SNP	tv	map_l250_m2_e0	homalt	98.3252	97.1185	99.5624	88.0052	910	27	910	4	4	100.0000
rpoplin-dv42	SNP	tv	map_l250_m1_e0	homalt	98.2249	96.9626	99.5204	86.9197	830	26	830	4	4	100.0000
rpoplin-dv42	SNP	tv	map_l250_m0_e0	homalt	96.2766	93.7824	98.9071	92.7981	181	12	181	2	2	100.0000
rpoplin-dv42	SNP	tv	map_l150_m2_e1	homalt	99.2828	98.7905	99.7801	74.0325	4084	50	4084	9	9	100.0000
rpoplin-dv42	SNP	tv	map_l150_m2_e0	homalt	99.2738	98.7754	99.7773	74.0315	4033	50	4033	9	9	100.0000
rpoplin-dv42	SNP	tv	map_l150_m1_e0	homalt	99.2485	98.7329	99.7695	71.6659	3896	50	3896	9	9	100.0000
rpoplin-dv42	SNP	tv	map_l150_m0_e0	homalt	98.3607	97.1386	99.6139	76.6034	1290	38	1290	5	5	100.0000
rpoplin-dv42	SNP	tv	map_l125_m2_e1	homalt	99.4382	99.0780	99.8010	69.8334	6018	56	6018	12	12	100.0000
rpoplin-dv42	SNP	tv	map_l125_m2_e0	homalt	99.4329	99.0693	99.7991	69.7738	5961	56	5961	12	12	100.0000
rpoplin-dv42	SNP	tv	map_l125_m1_e0	homalt	99.4262	99.0614	99.7937	67.2577	5805	55	5805	12	12	100.0000
rpoplin-dv42	SNP	tv	map_l125_m0_e0	homalt	98.8647	98.0189	99.7251	70.7294	2177	44	2177	6	6	100.0000
rpoplin-dv42	SNP	tv	map_l100_m2_e1	homalt	99.5691	99.3550	99.7841	64.9074	9242	60	9242	20	18	90.0000
rpoplin-dv42	SNP	tv	map_l100_m2_e0	homalt	99.5649	99.3488	99.7820	64.8909	9154	60	9154	20	18	90.0000
rpoplin-dv42	SNP	tv	map_l100_m1_e0	homalt	99.5567	99.3365	99.7779	62.4922	8983	60	8983	20	18	90.0000
rpoplin-dv42	SNP	tv	map_l100_m0_e0	homalt	99.1768	98.6739	99.6848	64.1086	3795	51	3795	12	10	83.3333
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9618	99.9237	100.0000	35.5315	1310	1	1310	0	0
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	homalt	92.3077	100.0000	85.7143	92.0455	6	0	6	1	1	100.0000
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8009	99.9637	99.6386	38.4564	2757	1	2757	10	2	20.0000
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9614	99.9228	100.0000	59.5375	3884	3	3884	0	0
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	homalt	88.8889	88.8889	88.8889	94.0000	8	1	8	1	0	0.0000
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7731	99.5473	100.0000	61.8604	1759	8	1759	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7694	99.7050	99.8338	75.7174	5407	16	5407	9	2	22.2222
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.7660	99.5995	99.9330	82.3251	1492	6	1492	1	0	0.0000
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.7863	99.5736	100.0000	84.3551	467	2	467	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.6047	99.4083	99.8020	85.1950	504	3	504	1	0	0.0000
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	97.5610	97.5610	97.5610	91.2206	40	1	40	1	0	0.0000
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	69.3435	523	2	523	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.8726	99.7455	100.0000	64.4122	784	2	784	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8959	99.7921	100.0000	53.7572	480	1	480	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7694	99.7050	99.8338	75.7174	5407	16	5407	9	2	22.2222
rpoplin-dv42	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8811	99.8613	99.9009	61.7921	10083	14	10083	10	2	20.0000
rpoplin-dv42	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6183	99.6183	99.6183	66.9401	522	2	522	2	1	50.0000
rpoplin-dv42	SNP	tv	func_cds	homalt	99.9706	99.9413	100.0000	27.8695	1703	1	1703	0	0
rpoplin-dv42	SNP	tv	decoy	homalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	SNP	tv	HG002compoundhet	homalt	99.7491	99.8229	99.6753	42.8668	3382	6	3377	11	9	81.8182
rpoplin-dv42	SNP	tv	HG002complexvar	homalt	99.9385	99.9201	99.9569	22.8530	95035	76	95011	41	37	90.2439
rpoplin-dv42	SNP	tv	*	homalt	99.9702	99.9650	99.9753	20.9652	376991	132	376970	93	51	54.8387
rpoplin-dv42	SNP	ti	tech_badpromoters	homalt	98.7952	100.0000	97.6190	46.1538	41	0	41	1	1	100.0000

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