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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotype F-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85751-85800 / 86044 show all
ghariani-varprowlINDELI16_PLUSHG002complexvarhomalt
82.5036
76.0518
90.1515
62.3395
235742382626
100.0000
ghariani-varprowlINDELI16_PLUSHG002compoundhethomalt
7.5000
100.0000
3.8961
67.2340
3037473
98.6486
ghariani-varprowlINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI16_PLUSfunc_cdshomalt
66.6667
50.0000
100.0000
85.7143
11100
ghariani-varprowlINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
32.2581
20.0000
83.3333
94.0594
520511
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
63.8406
59.0164
69.5238
78.0335
7250733231
96.8750
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
50.5393
38.0488
75.2381
84.0909
78127792625
96.1538
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
34.4828
20.8333
100.0000
91.2281
519500
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
55.0459
40.0000
88.2353
78.7500
14211522
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
76.3006
68.7500
85.7143
66.6667
1151222
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
43.9024
39.1304
50.0000
86.0465
914998
88.8889
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
45.0000
40.9091
50.0000
82.1782
913998
88.8889
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
48.6558
37.7049
68.5714
84.9138
2338241110
90.9091
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
50.5393
38.0488
75.2381
84.0909
78127792625
96.1538
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
56.7901
56.0976
57.5000
80.9524
2318231716
94.1176
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
57.1429
50.0000
66.6667
85.7143
22211
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
66.2963
49.5845
100.0000
63.8554
17918218000
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
79.4286
65.8768
100.0000
53.5117
1397213900
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
34.8632
22.3938
78.6667
77.6119
58201591616
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
55.3485
41.4226
83.3803
72.9627
2974202965957
96.6102
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
64.2160
51.7316
84.6429
72.1670
2392232374341
95.3488
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
58.3031
43.3824
88.8679
72.0464
4726164715957
96.6102
ghariani-varprowlINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
59.8657
45.0761
89.0995
75.7842
5636865646966
95.6522
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
69.6305
59.6491
83.6237
65.9953
2381612404745
95.7447
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
44.9438
31.4961
78.4314
66.6667
4087401111
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
68.5714
52.1739
100.0000
94.6188
12111200
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
81.4815
73.3333
91.6667
98.2609
1141111
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
55.8190
40.4348
90.0990
79.0021
9313791109
90.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
20.6573
11.7647
84.6154
90.8451
12901122
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
58.4615
42.2222
95.0000
72.9730
19261911
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
35.2941
23.0769
75.0000
69.2308
310311
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD16_PLUSmap_l100_m0_e0homalt
88.8889
80.0000
100.0000
99.2233
41400
ghariani-varprowlINDELD16_PLUSmap_l100_m1_e0homalt
69.5652
53.3333
100.0000
98.5841
87800
ghariani-varprowlINDELD16_PLUSmap_l100_m2_e0homalt
72.0000
56.2500
100.0000
98.4375
97900
ghariani-varprowlINDELD16_PLUSmap_l100_m2_e1homalt
72.0000
56.2500
100.0000
98.4402
97900
ghariani-varprowlINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
99.5833
20200
ghariani-varprowlINDELD16_PLUSmap_l125_m1_e0homalt
85.7143
75.0000
100.0000
99.4094
31300
ghariani-varprowlINDELD16_PLUSmap_l125_m2_e0homalt
85.7143
75.0000
100.0000
99.4152
31300
ghariani-varprowlINDELD16_PLUSmap_l125_m2_e1homalt
85.7143
75.0000
100.0000
99.4152
31300