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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1687 1688 1689 1690 1691 1692 1693 1694 1695 ... 1720 1721 » 84501-84550 / 86044 show all
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	45	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	13	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l100_m0_e0	homalt		0.0000	0.0000	0.0000	0	5	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l100_m1_e0	homalt		0.0000	0.0000	0.0000	0	15	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	16	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l100_m2_e1	homalt		0.0000	0.0000	0.0000	0	16	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l125_m0_e0	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l125_m1_e0	homalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l125_m2_e0	homalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l125_m2_e1	homalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l150_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l150_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l150_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l150_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I16_PLUS	map_l150_m2_e0	homalt	85.7143	100.0000	75.0000	97.5155	3	0	3	1	0	0.0000
hfeng-pmm1	INDEL	I16_PLUS	map_l150_m2_e1	homalt	85.7143	100.0000	75.0000	97.5155	3	0	3	1	0	0.0000
hfeng-pmm1	INDEL	I16_PLUS	map_l250_m0_e0	homalt		0.0000	0.0000	98.6842	0	0	0	1	0	0.0000
hfeng-pmm1	INDEL	I16_PLUS	map_l250_m1_e0	homalt		0.0000	0.0000	99.1228	0	0	0	1	0	0.0000
hfeng-pmm1	INDEL	I16_PLUS	map_l250_m2_e0	homalt		0.0000	0.0000	99.1667	0	0	0	1	0	0.0000
hfeng-pmm1	INDEL	I16_PLUS	map_l250_m2_e1	homalt		0.0000	0.0000	99.1736	0	0	0	1	0	0.0000
hfeng-pmm1	INDEL	I16_PLUS	map_siren	homalt	95.2381	95.2381	95.2381	94.8780	20	1	20	1	1	100.0000
hfeng-pmm1	INDEL	I16_PLUS	segdup	homalt	100.0000	100.0000	100.0000	94.3452	19	0	19	0	0
hfeng-pmm1	INDEL	I16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
hfeng-pmm1	INDEL	I1_5	*	homalt	99.7725	99.7799	99.7651	52.5960	60295	133	60299	142	137	96.4789
hfeng-pmm1	INDEL	I1_5	HG002complexvar	homalt	99.8625	99.8736	99.8514	52.0252	13431	17	13435	20	17	85.0000
hfeng-pmm1	INDEL	I1_5	HG002compoundhet	homalt	83.5249	99.3921	72.0264	83.4186	327	2	327	127	126	99.2126
hfeng-pmm1	INDEL	I1_5	decoy	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	func_cds	homalt	100.0000	100.0000	100.0000	30.8140	119	0	119	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	97.0018	97.1731	96.8310	69.5931	275	8	275	9	9	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5198	99.6042	99.4355	71.4918	3523	14	3523	20	20	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.2411	99.0960	99.3867	70.6527	3727	34	3727	23	22	95.6522
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.2519	99.5000	99.0050	61.8596	199	1	199	2	2	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	74.8818	478	0	478	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	78.0735	346	0	346	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	91.4634	91.4634	91.4634	76.4368	75	7	75	7	7	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.8395	97.6888	97.9907	65.9474	634	15	634	13	13	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.7719	98.5989	98.9455	64.4153	563	8	563	6	6	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.6837	98.6418	98.7256	72.6343	1162	16	1162	15	15	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.2411	99.0960	99.3867	70.6527	3727	34	3727	23	22	95.6522
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.5579	99.8227	99.2945	72.0827	563	1	563	4	4	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8968	100.0000	99.7938	63.6432	968	0	968	2	2	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4843	99.6244	99.3446	67.0980	1061	4	1061	7	7	100.0000

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