PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotype F-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83551-83600 / 86044 show all
gduggal-snapvardINDELC16_PLUS*homalt
0.0000
0.0000
93.3333
00031
33.3333
gduggal-snapvardINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
86.6667
00021
50.0000
gduggal-snapvardINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l100_m0_e0homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l100_m1_e0homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l100_m2_e0homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l100_m2_e1homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l125_m0_e0homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l125_m1_e0homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l125_m2_e0homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l125_m2_e1homalt
0.0000
100.0000
00000
gduggal-snapvardINDELC16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_triTR_11to50homalt
82.6052
70.6331
99.4641
48.4530
92638592854
80.0000
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatSNPtvmap_l100_m0_e0homalt
92.5848
86.1934
100.0000
67.9954
3315531331600
gduggal-snapplatSNPtvmap_l100_m1_e0homalt
95.2001
90.9101
99.9149
63.7649
8221822822272
28.5714
gduggal-snapplatSNPtvmap_l100_m2_e0homalt
95.2754
91.0462
99.9166
66.1343
8389825839072
28.5714
gduggal-snapplatSNPtvmap_l100_m2_e1homalt
95.2868
91.0664
99.9174
66.1273
8471831847172
28.5714
gduggal-snapplatSNPtvmap_l125_m0_e0homalt
90.2668
82.2602
100.0000
75.6753
1827394182800
gduggal-snapplatSNPtvmap_l125_m1_e0homalt
93.4557
87.7304
99.9806
69.1888
5141719514210
0.0000
gduggal-snapplatSNPtvmap_l125_m2_e0homalt
93.5527
87.9009
99.9811
71.5032
5289728529010
0.0000
gduggal-snapplatSNPtvmap_l125_m2_e1homalt
93.5797
87.9486
99.9813
71.5146
5342732534210
0.0000
gduggal-snapplatSNPtvmap_l150_m0_e0homalt
88.6840
79.6687
100.0000
81.7822
1058270105900