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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 829 830 831 832 833 834 835 836 837 ... 1720 1721 » 41601-41650 / 86044 show all
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1132	96.2963	100.0000	78.8043	78	3	78	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	88.0734	78.6885	100.0000	52.4752	48	13	48	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4318	98.8701	100.0000	74.3402	175	2	175	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.5904	95.2941	100.0000	52.8736	81	4	82	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5851	99.1736	100.0000	69.2994	240	2	241	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	72.3982	122	0	122	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	98.0392	96.1538	100.0000	54.0541	50	2	51	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	70.6897	68	0	68	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	het	98.7468	98.3607	99.1361	82.5283	480	8	459	4	0	0.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	het	0.0000	88.8889	0.0000	98.2456	8	1	0	1	0	0.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	98.6928	97.4194	100.0000	82.8829	151	4	152	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.1870	98.3871	100.0000	86.8365	61	1	62	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	96.4706	93.1818	100.0000	72.8477	41	3	41	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	100.0000	100.0000	100.0000	81.5789	49	0	49	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8656	2	0	2	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.3243	2	0	2	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2418	98.9224	99.5633	72.5090	459	5	456	2	0	0.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	97.7671	95.6318	100.0000	40.4831	613	28	616	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	*	96.9529	94.0860	100.0000	69.8795	175	11	175	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	95.5224	91.4286	100.0000	91.2281	32	3	25	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	97.2789	94.7020	100.0000	44.2379	143	8	150	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.5192	99.0431	100.0000	47.9899	414	4	414	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.1736	98.3607	100.0000	63.0435	120	2	119	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5763	99.1561	100.0000	23.6246	235	2	236	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	100.0000	100.0000	100.0000	64.2424	59	0	59	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	*	100.0000	100.0000	100.0000	67.5000	13	0	13	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	het		100.0000		100.0000	1	0	0	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	100.0000	100.0000	100.0000	35.0000	12	0	13	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I6_15	map_l100_m0_e0	hetalt	85.7143	75.0000	100.0000	90.0000	3	1	3	0	0
ckim-gatk	INDEL	I6_15	map_l100_m0_e0	homalt	95.6522	91.6667	100.0000	91.2000	11	1	11	0	0
ckim-gatk	INDEL	I6_15	map_l100_m1_e0	hetalt	95.2381	90.9091	100.0000	80.0000	20	2	20	0	0
ckim-gatk	INDEL	I6_15	map_l100_m1_e0	homalt	98.4615	96.9697	100.0000	89.0411	32	1	32	0	0
ckim-gatk	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	81.6514	20	2	20	0	0

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