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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 824 825 826 827 828 829 830 831 832 ... 1720 1721 » 41351-41400 / 86044 show all
ckim-gatk	INDEL	D6_15	map_l250_m2_e1	het	96.5517	100.0000	93.3333	97.8198	14	0	14	1	0	0.0000
ckim-gatk	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
ckim-gatk	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	96.3855	6	0	6	0	0
ckim-gatk	INDEL	D6_15	map_siren	hetalt	96.8750	93.9394	100.0000	75.7180	93	6	93	0	0
ckim-gatk	INDEL	D6_15	map_siren	homalt	98.4496	97.6923	99.2188	84.0994	127	3	127	1	0	0.0000
ckim-gatk	INDEL	D6_15	segdup	het	95.2381	97.8261	92.7835	96.4154	90	2	90	7	0	0.0000
ckim-gatk	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4968	44	5	44	0	0
ckim-gatk	INDEL	D6_15	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	D6_15	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	D6_15	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	D6_15	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	51.4286	17	0	17	0	0
ckim-gatk	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	52.3810	10	0	10	0	0
ckim-gatk	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-gatk	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ckim-gatk	INDEL	I16_PLUS	HG002complexvar	het	99.4709	98.9474	100.0000	64.5414	658	7	634	0	0
ckim-gatk	INDEL	I16_PLUS	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	func_cds	*	95.6522	91.6667	100.0000	77.5510	11	1	11	0	0
ckim-gatk	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	70.0000	9	0	9	0	0
ckim-gatk	INDEL	I16_PLUS	func_cds	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-gatk	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	96.1564	94.7368	97.6190	90.9968	90	5	82	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.1677	87.2093	100.0000	76.4205	75	11	83	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.6744	97.2222	98.1308	89.4789	105	3	105	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	96.9223	96.9697	96.8750	89.3864	64	2	62	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	97.1429	94.4444	100.0000	83.4783	17	1	19	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	91.9732	24	0	24	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.1501	98.3146	100.0000	81.2834	175	3	175	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5349	99.0741	100.0000	81.1151	107	1	105	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.0588	94.2857	100.0000	75.5245	33	2	35	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	85.1695	35	0	35	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.4350	98.8764	100.0000	76.2803	88	1	88	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	76.0181	53	0	53	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	97.4359	95.0000	100.0000	65.4545	19	1	19	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	83.1579	16	0	16	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	96.1538	92.5926	100.0000	92.1875	25	2	20	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	91.7431	84.7458	100.0000	72.2222	50	9	55	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0

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