PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
40601-40650 / 86044 show all | |||||||||||||||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e0 | hetalt | 91.6667 | 84.6154 | 100.0000 | 77.5701 | 22 | 4 | 24 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e1 | hetalt | 90.9091 | 83.3333 | 100.0000 | 76.9231 | 25 | 5 | 27 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.5612 | 2 | 0 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m1_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 94.2857 | 2 | 1 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m1_e0 | homalt | 88.8889 | 100.0000 | 80.0000 | 98.0469 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 94.5946 | 2 | 1 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e0 | homalt | 80.0000 | 100.0000 | 66.6667 | 98.0392 | 4 | 0 | 4 | 2 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e1 | hetalt | 66.6667 | 50.0000 | 100.0000 | 94.7368 | 2 | 2 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e1 | homalt | 80.0000 | 100.0000 | 66.6667 | 98.0707 | 4 | 0 | 4 | 2 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | * | 82.3529 | 100.0000 | 70.0000 | 97.6581 | 7 | 0 | 7 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | het | 82.3529 | 100.0000 | 70.0000 | 96.8944 | 7 | 0 | 7 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m0_e0 | * | 50.0000 | 100.0000 | 33.3333 | 98.2456 | 1 | 0 | 1 | 2 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l250_m0_e0 | het | 50.0000 | 100.0000 | 33.3333 | 97.7273 | 1 | 0 | 1 | 2 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.7952 | 1 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.8095 | 1 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_siren | hetalt | 91.2281 | 83.8710 | 100.0000 | 82.6087 | 26 | 5 | 28 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | segdup | hetalt | 80.0000 | 66.6667 | 100.0000 | 93.4959 | 6 | 3 | 8 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 42.8571 | 4 | 0 | 4 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 0.0000 | 4 | 0 | 4 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | D16_PLUS | tech_badpromoters | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D1_5 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9714 | 4 | 0 | 4 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9833 | 2 | 0 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.6610 | 1 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9407 | 1 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | func_cds | * | 98.1481 | 100.0000 | 96.3636 | 44.8161 | 159 | 0 | 159 | 6 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D1_5 | func_cds | het | 96.5909 | 100.0000 | 93.4066 | 52.8497 | 85 | 0 | 85 | 6 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D1_5 | func_cds | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D1_5 | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 29.5238 | 74 | 0 | 74 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 98.8197 | 11 | 0 | 11 | 0 | 0 | ||
| ckim-dragen | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 100.0000 | 100.0000 | 100.0000 | 98.6949 | 8 | 0 | 8 | 0 | 0 | ||