PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
39401-39450 / 86044 show all
ciseli-customINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
98.1982
20200
ciseli-customINDELD6_15map_l250_m1_e0*
60.6061
55.5556
66.6667
97.9812
1081050
0.0000
ciseli-customINDELD6_15map_l250_m1_e0het
47.6190
45.4545
50.0000
98.1273
56550
0.0000
ciseli-customINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
ciseli-customINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
97.6077
50500
ciseli-customINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
ciseli-customINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
ciseli-customINDELD6_15map_sirenhetalt
0.0000
7.0707
0.0000
0.0000
792000
ciseli-customINDELD6_15segduphetalt
0.0000
12.2449
0.0000
0.0000
643000
ciseli-customINDELD6_15segdupwithalt*
0.0000
100.0000
00000
ciseli-customINDELD6_15segdupwithalthet
0.0000
100.0000
00000
ciseli-customINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
ciseli-customINDELD6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
ciseli-customINDELI16_PLUS*hetalt
0.0000
0.0477
0.0000
0.0000
12097000
ciseli-customINDELI16_PLUSHG002complexvarhetalt
0.0000
0.2985
0.0000
0.0000
1334000
ciseli-customINDELI16_PLUSHG002compoundhethetalt
0.0000
0.0478
0.0000
0.0000
12092000
ciseli-customINDELI16_PLUSdecoy*
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSfunc_cds*
0.0000
100.0000
012000
ciseli-customINDELI16_PLUSfunc_cdshet
0.0000
100.0000
09000
ciseli-customINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
ciseli-customINDELI16_PLUSfunc_cdshomalt
0.0000
100.0000
02000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
086000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0583000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
0659000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
018000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
035000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
25.8065
15.0943
88.8889
83.3333
845810
0.0000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
020000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
059000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0341000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0286000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0380000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
0659000
ciseli-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
0279000