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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
28551-28600 / 86044 show all
dgrover-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
94.3396
100.0000
89.2857
92.7273
2502532
66.6667
dgrover-gatkINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.3738
95.1973
99.6522
66.4723
5552857322
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.4450
95.2959
99.6933
71.1249
6283165022
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.4132
89.6552
97.5000
85.2399
7897822
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
50.0000
100.0000
33.3333
95.2381
10122
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
95.2384
92.4812
98.1651
88.0482
1231010722
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.7596
92.3754
99.4012
59.5152
3152633222
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
95.0290
92.4528
97.7528
87.1573
9888722
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.0450
93.0070
99.2883
56.0250
2662027922
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.6277
95.1220
98.1818
88.6246
2341221642
50.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.0678
92.8947
99.4652
64.2789
3532737222
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.4450
95.2959
99.6933
71.1249
6283165022
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
95.7511
92.4731
99.2701
67.4197
2582127222
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
94.7122
93.6170
95.8333
81.2500
4434622
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
80.0000
100.0000
66.6667
90.1639
40422
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.3638
94.8948
99.9647
39.6673
5595301565622
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.5960
99.4864
99.7059
77.5541
13567135642
50.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7912
100.0000
99.5833
76.0359
478047822
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
97.0210
94.2544
99.9549
27.4378
4380267443322
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.6126
95.3835
99.9483
25.9281
3843186386922
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.9791
94.1744
99.9560
31.2217
4494278454722
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.3638
94.8948
99.9647
39.6673
5595301565622
100.0000
dgrover-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8968
100.0000
99.7938
64.2462
968096822
100.0000
dgrover-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.6269
100.0000
99.2565
66.5423
267026722
100.0000
dgrover-gatkINDELI1_5map_l125_m0_e0*
98.0676
98.0645
98.0707
89.6815
304630562
33.3333
dgrover-gatkINDELI1_5map_l125_m0_e0homalt
98.2609
99.1228
97.4138
85.9564
113111332
66.6667
dgrover-gatkINDELI1_5map_l125_m1_e0*
98.7950
98.6747
98.9157
86.7327
8191182192
22.2222
dgrover-gatkINDELI1_5map_l125_m1_e0homalt
99.3902
99.6942
99.0881
83.5088
326132632
66.6667
dgrover-gatkINDELI1_5map_l125_m2_e0*
98.8330
98.7165
98.9498
87.7955
8461184892
22.2222
dgrover-gatkINDELI1_5map_l125_m2_e0homalt
99.4152
99.7067
99.1254
84.7216
340134032
66.6667
dgrover-gatkINDELI1_5map_l125_m2_e1*
98.8504
98.7356
98.9655
87.9150
8591186192
22.2222
dgrover-gatkINDELI1_5map_l125_m2_e1homalt
99.4186
99.7085
99.1304
84.9608
342134232
66.6667
dgrover-gatkINDELI1_5map_l150_m0_e0*
97.7192
97.1591
98.2857
92.7023
171517232
66.6667
dgrover-gatkINDELI1_5map_l150_m0_e0homalt
98.5294
100.0000
97.1014
89.2188
6706722
100.0000
dgrover-gatkINDELI1_5map_l150_m1_e0*
98.4186
98.2213
98.6166
89.9303
497949972
28.5714
dgrover-gatkINDELI1_5map_l150_m1_e0homalt
98.9950
99.4949
98.5000
87.0801
197119732
66.6667
dgrover-gatkINDELI1_5map_l150_m2_e0*
98.4582
98.2659
98.6513
90.9250
510951272
28.5714
dgrover-gatkINDELI1_5map_l150_m2_e0homalt
99.0099
99.5025
98.5222
88.5634
200120032
66.6667
dgrover-gatkINDELI1_5map_l150_m2_e1*
98.4930
98.3051
98.6817
90.9679
522952472
28.5714
dgrover-gatkINDELI1_5map_l150_m2_e1homalt
99.0244
99.5098
98.5437
88.6501
203120332
66.6667
dgrover-gatkINDELI1_5map_l250_m1_e0*
95.6938
94.3396
97.0874
96.3358
100610032
66.6667
dgrover-gatkINDELI1_5map_l250_m1_e0homalt
96.6292
97.7273
95.5556
94.3396
4314322
100.0000
dgrover-gatkINDELI1_5map_l250_m2_e0*
95.9641
94.6903
97.2727
96.6616
107610732
66.6667
dgrover-gatkINDELI1_5map_l250_m2_e0homalt
96.7033
97.7778
95.6522
95.0749
4414422
100.0000
dgrover-gatkINDELI1_5map_l250_m2_e1*
96.0000
94.7368
97.2973
96.7401
108610832
66.6667
dgrover-gatkINDELI1_5map_l250_m2_e1homalt
96.7742
97.8261
95.7447
95.1093
4514522
100.0000
dgrover-gatkINDELI1_5segdup*
99.2921
99.2446
99.3396
94.6513
10518105372
28.5714
dgrover-gatkINDELI1_5segduphomalt
99.5772
99.5772
99.5772
92.8776
471247122
100.0000
dgrover-gatkINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
97.0618
95.9514
98.1982
81.3445
2371021842
50.0000
dgrover-gatkINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.8406
95.8333
99.9338
44.4975
2990130301922
100.0000