PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
84751-84800 / 86044 show all
rpoplin-dv42INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.1787
90900
rpoplin-dv42INDELI1_5map_l250_m1_e0hetalt
80.0000
100.0000
66.6667
98.1481
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e0hetalt
80.0000
100.0000
66.6667
98.5366
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e1hetalt
80.0000
100.0000
66.6667
98.5714
20210
0.0000
rpoplin-dv42INDELI1_5map_sirenhetalt
95.4545
93.7500
97.2222
89.4325
105710530
0.0000
rpoplin-dv42INDELI1_5segduphetalt
95.6522
91.6667
100.0000
96.7407
4444400
rpoplin-dv42INDELI1_5segdupwithalt*
0.0000
100.0000
00000
rpoplin-dv42INDELI1_5segdupwithalthet
0.0000
100.0000
00000
rpoplin-dv42INDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
59.2593
2202200
rpoplin-dv42INDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
55.5556
80800
rpoplin-dv42INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
66.6667
10100
rpoplin-dv42INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
60.6061
1301300
rpoplin-dv42INDELI6_15decoy*
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15decoyhet
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15decoyhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15decoyhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
rpoplin-dv42INDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
25.0000
31300
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
85.9813
75.4098
100.0000
55.3398
46154600
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.3415
92.9412
100.0000
56.2842
7968000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.0297
94.2308
100.0000
57.9832
4935000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
98.5075
97.0588
100.0000
69.7248
6626600
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
86.7395
76.5840
100.0000
47.5746
2788528100
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
09000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
91.5663
86.3636
97.4359
74.3421
3863810
0.0000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
98.9691
97.9592
100.0000
81.1024
4814800
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
66.6667
50.0000
100.0000
99.9132
11100
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
66.6667
50.0000
100.0000
99.4624
11100
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
97.6856
95.4758
100.0000
42.8172
6122961300
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
91.5452
84.4086
100.0000
70.6542
1572915700
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
83.3333
71.4286
100.0000
91.2698
25102200
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
93.2862
87.4172
100.0000
47.6744
1321913500
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000