PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
84451-84500 / 86044 show all
rpoplin-dv42INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7448
30300
rpoplin-dv42INDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.9645
5025000
rpoplin-dv42INDELD1_5segduphomalt
99.7207
99.4429
100.0000
94.4210
357235700
rpoplin-dv42INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9937
10100
rpoplin-dv42INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9898
10100
rpoplin-dv42INDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
44.1176
1901900
rpoplin-dv42INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
42.8571
80800
rpoplin-dv42INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
rpoplin-dv42INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
90900
rpoplin-dv42INDELD6_15decoy*
100.0000
100.0000
100.0000
99.9005
10100
rpoplin-dv42INDELD6_15decoyhet
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
98.9474
10100
rpoplin-dv42INDELD6_15decoyhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
rpoplin-dv42INDELD6_15func_cdshomalt
90.9091
83.3333
100.0000
60.0000
1021000
rpoplin-dv42INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
66.6667
50.0000
100.0000
95.6522
11100
rpoplin-dv42INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
56.6265
3633600
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
97.6190
95.3488
100.0000
77.2222
4124100
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
66.6667
50.0000
100.0000
94.1176
11100
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.0579
98.3957
99.7290
58.9087
368636810
0.0000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.1202
98.5423
99.7050
56.9250
338533810
0.0000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.5920
7407400
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
94.1176
88.8889
100.0000
98.5294
81800
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.7056
60600
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7642
99.5294
100.0000
48.4461
846484600
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.4325
98.8713
100.0000
31.8818
438543800
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
97.5610
95.2381
100.0000
39.3939
2012000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15map_l100_m0_e0hetalt
94.4444
89.4737
100.0000
83.1683
1721700
rpoplin-dv42INDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
91.0853
2312300
rpoplin-dv42INDELD6_15map_l100_m1_e0hetalt
92.9134
86.7647
100.0000
72.5581
5995900
rpoplin-dv42INDELD6_15map_l100_m1_e0homalt
97.6378
96.8750
98.4127
85.6818
6226210
0.0000
rpoplin-dv42INDELD6_15map_l100_m2_e0hetalt
92.9134
86.7647
100.0000
73.6607
5995900
rpoplin-dv42INDELD6_15map_l100_m2_e0homalt
97.6744
96.9231
98.4375
85.9956
6326310
0.0000
rpoplin-dv42INDELD6_15map_l100_m2_e1hetalt
92.6471
86.3014
100.0000
73.5294
63106300
rpoplin-dv42INDELD6_15map_l100_m2_e1homalt
97.7444
97.0149
98.4848
85.8974
6526510
0.0000
rpoplin-dv42INDELD6_15map_l125_m0_e0*
97.8723
97.8723
97.8723
93.1785
4614610
0.0000