PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
83301-83350 / 86044 show all
ltrigg-rtg1INDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.8367
80800
ltrigg-rtg1INDELD6_15map_l150_m1_e0homalt
98.0392
96.1538
100.0000
86.0465
2512400
ltrigg-rtg1INDELD6_15map_l150_m2_e0*
98.7654
97.5610
100.0000
88.0734
8027800
ltrigg-rtg1INDELD6_15map_l150_m2_e0het
98.9011
97.8261
100.0000
87.6056
4514400
ltrigg-rtg1INDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.4528
80800
ltrigg-rtg1INDELD6_15map_l150_m2_e0homalt
98.1818
96.4286
100.0000
86.5285
2712600
ltrigg-rtg1INDELD6_15map_l150_m2_e1*
98.2036
96.4706
100.0000
88.0419
8238000
ltrigg-rtg1INDELD6_15map_l150_m2_e1het
98.9247
97.8723
100.0000
87.6033
4614500
ltrigg-rtg1INDELD6_15map_l150_m2_e1hetalt
94.1176
88.8889
100.0000
92.6606
81800
ltrigg-rtg1INDELD6_15map_l150_m2_e1homalt
98.2456
96.5517
100.0000
86.2944
2812700
ltrigg-rtg1INDELD6_15map_l250_m0_e0*
90.9091
83.3333
100.0000
97.2067
51500
ltrigg-rtg1INDELD6_15map_l250_m0_e0het
85.7143
75.0000
100.0000
96.5116
31300
ltrigg-rtg1INDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.5517
20200
ltrigg-rtg1INDELD6_15map_l250_m1_e0*
97.1429
94.4444
100.0000
94.5687
1711700
ltrigg-rtg1INDELD6_15map_l250_m1_e0het
95.2381
90.9091
100.0000
93.9394
1011000
ltrigg-rtg1INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.4912
20200
ltrigg-rtg1INDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
94.5055
50500
ltrigg-rtg1INDELD6_15map_l250_m2_e0*
97.6744
95.4545
100.0000
93.9058
2112200
ltrigg-rtg1INDELD6_15map_l250_m2_e0het
96.2963
92.8571
100.0000
92.6316
1311400
ltrigg-rtg1INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.9231
20200
ltrigg-rtg1INDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
94.3396
60600
ltrigg-rtg1INDELD6_15map_l250_m2_e1*
97.6744
95.4545
100.0000
94.0860
2112200
ltrigg-rtg1INDELD6_15map_l250_m2_e1het
96.2963
92.8571
100.0000
92.8571
1311400
ltrigg-rtg1INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9697
20200
ltrigg-rtg1INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
94.5455
60600
ltrigg-rtg1INDELD6_15map_sirenhet
97.8430
97.5000
98.1884
80.0145
273727150
0.0000
ltrigg-rtg1INDELD6_15map_sirenhomalt
97.6500
96.1538
99.1935
78.0142
125512310
0.0000
ltrigg-rtg1INDELD6_15segdup*
96.5000
94.2408
98.8701
91.4327
1801117520
0.0000
ltrigg-rtg1INDELD6_15segduphet
97.1910
96.7391
97.6471
92.1803
8938320
0.0000
ltrigg-rtg1INDELD6_15segduphetalt
92.3077
85.7143
100.0000
90.5702
4274300
ltrigg-rtg1INDELD6_15segduphomalt
98.9899
98.0000
100.0000
90.6310
4914900
ltrigg-rtg1INDELD6_15segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
48.4848
1701700
ltrigg-rtg1INDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
41.1765
1001000
ltrigg-rtg1INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
66.6667
10100
ltrigg-rtg1INDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
ltrigg-rtg1INDELI16_PLUSdecoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSdecoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSfunc_cds*
90.9091
83.3333
100.0000
50.0000
1021000
ltrigg-rtg1INDELI16_PLUSfunc_cdshet
94.1176
88.8889
100.0000
42.8571
81800
ltrigg-rtg1INDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
ltrigg-rtg1INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
73.1672
58.9474
96.4286
75.9657
56395420
0.0000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000