PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
83201-83250 / 86044 show all
ltrigg-rtg1INDELD1_5map_l250_m0_e0het
91.8033
84.8485
100.0000
92.3483
2852900
ltrigg-rtg1INDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.9194
1301300
ltrigg-rtg1INDELD1_5map_l250_m1_e0*
95.4128
91.2281
100.0000
91.6132
1561515700
ltrigg-rtg1INDELD1_5map_l250_m1_e0het
92.7536
86.4865
100.0000
88.6179
96159800
ltrigg-rtg1INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8235
30200
ltrigg-rtg1INDELD1_5map_l250_m1_e0homalt
100.0000
100.0000
100.0000
93.2224
5705700
ltrigg-rtg1INDELD1_5map_l250_m2_e0*
95.7507
91.8478
100.0000
92.2161
1691517000
ltrigg-rtg1INDELD1_5map_l250_m2_e0het
93.3921
87.6033
100.0000
89.4839
1061510800
ltrigg-rtg1INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.9691
30200
ltrigg-rtg1INDELD1_5map_l250_m2_e0homalt
100.0000
100.0000
100.0000
93.7695
6006000
ltrigg-rtg1INDELD1_5map_l250_m2_e1*
95.7746
91.8919
100.0000
92.3627
1701517100
ltrigg-rtg1INDELD1_5map_l250_m2_e1het
93.4498
87.7049
100.0000
89.6190
1071510900
ltrigg-rtg1INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.9950
30200
ltrigg-rtg1INDELD1_5map_l250_m2_e1homalt
100.0000
100.0000
100.0000
93.9394
6006000
ltrigg-rtg1INDELD1_5segdup*
99.1335
98.5494
99.7245
92.9129
108716108630
0.0000
ltrigg-rtg1INDELD1_5segduphet
98.6884
97.8324
99.5595
91.9044
6771567830
0.0000
ltrigg-rtg1INDELD1_5segduphetalt
99.0291
98.0769
100.0000
96.0426
5115200
ltrigg-rtg1INDELD1_5segduphomalt
100.0000
100.0000
100.0000
93.6879
359035600
ltrigg-rtg1INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9916
10100
ltrigg-rtg1INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9847
10100
ltrigg-rtg1INDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5tech_badpromoters*
97.2973
94.7368
100.0000
30.7692
1811800
ltrigg-rtg1INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
33.3333
80800
ltrigg-rtg1INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
33.3333
20200
ltrigg-rtg1INDELD1_5tech_badpromotershomalt
94.1176
88.8889
100.0000
27.2727
81800
ltrigg-rtg1INDELD6_15HG002complexvarhomalt
99.0057
98.1180
99.9096
52.1005
114722110510
0.0000
ltrigg-rtg1INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8596
10100
ltrigg-rtg1INDELD6_15decoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0385
10100
ltrigg-rtg1INDELD6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15func_cds*
98.8235
97.6744
100.0000
46.8354
4214200
ltrigg-rtg1INDELD6_15func_cdshet
98.2456
96.5517
100.0000
41.6667
2812800
ltrigg-rtg1INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg1INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
52.0000
1201200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.3636
60600
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.7742
30300
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
20200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.8261
10100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
98.0769
97.6077
98.5507
70.1299
204520430
0.0000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.0299
98.4252
97.6378
70.6019
125212430
0.0000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
66.3717
3633800
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
71.6216
4304200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.4026
40400
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.7528
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.3000
98.9583
99.6441
61.5332
570656020
0.0000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8661
99.7326
100.0000
52.3748
373137100