PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1623 1624 1625 1626 1627 1628 1629 1630 1631 ... 1720 1721 » 81301-81350 / 86044 show all
jmaeng-gatk	INDEL	C1_5	map_l150_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l150_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m0_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m0_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_siren	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_siren	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	map_siren	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	*	*	0.0000	100.0000	0.0000	0.0000	7	0	0	0	0
jmaeng-gatk	INDEL	C6_15	*	het	0.0000	100.0000	0.0000	0.0000	7	0	0	0	0
jmaeng-gatk	INDEL	C6_15	*	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	*	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	decoy	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	decoy	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge