PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
80501-80550 / 86044 show all
jmaeng-gatkSNP*map_l125_m2_e1hetalt
77.5510
63.3333
100.0000
93.0909
19111900
jmaeng-gatkSNP*map_l150_m0_e0hetalt
50.0000
33.3333
100.0000
99.0476
12100
jmaeng-gatkSNP*map_l150_m1_e0hetalt
70.9677
55.0000
100.0000
94.4444
1191100
jmaeng-gatkSNP*map_l150_m2_e0hetalt
70.9677
55.0000
100.0000
95.2381
1191100
jmaeng-gatkSNP*map_l150_m2_e1hetalt
70.9677
55.0000
100.0000
95.2381
1191100
jmaeng-gatkSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkSNP*map_l250_m1_e0hetalt
0.0000
100.0000
04000
jmaeng-gatkSNP*map_l250_m2_e0hetalt
33.3333
20.0000
100.0000
99.3243
14100
jmaeng-gatkSNP*map_l250_m2_e1hetalt
33.3333
20.0000
100.0000
99.3243
14100
jmaeng-gatkSNP*segduphetalt
100.0000
100.0000
100.0000
98.5685
70700
jmaeng-gatkSNP*segdupwithalt*
0.0000
100.0000
00000
jmaeng-gatkSNP*segdupwithalthet
0.0000
100.0000
00000
jmaeng-gatkSNP*segdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkSNP*segdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkSNP*tech_badpromotershet
98.0132
96.1039
100.0000
48.2517
7437400
jmaeng-gatkSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtiHG002compoundhethetalt
98.9529
97.9275
100.0000
22.2222
5671256700
jmaeng-gatkSNPtidecoy*
0.0000
100.0000
00000
jmaeng-gatkSNPtidecoyhet
0.0000
100.0000
00000
jmaeng-gatkSNPtidecoyhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtidecoyhomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
61.9048
80800
jmaeng-gatkSNPtifunc_cdshomalt
99.9051
99.8104
100.0000
20.1062
526510526500
jmaeng-gatkSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.7543
99.5098
100.0000
59.5752
12186121800
jmaeng-gatkSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
90.9091
83.3333
100.0000
88.6364
51500
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.7711
1201200
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.8668
99.7340
100.0000
42.7189
11253112500
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9659
99.9318
100.0000
43.5670
14651146500
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.8975
99.9180
99.8770
52.7132
24372243730
0.0000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8418
99.8734
99.8102
55.3516
15782157830
0.0000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
46.9388
858085800
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
97.7778
95.6522
100.0000
90.5983
6636600
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100