PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
80401-80450 / 86044 show all
jmaeng-gatkINDELI6_15map_l125_m1_e0homalt
96.5517
93.3333
100.0000
92.8934
1411400
jmaeng-gatkINDELI6_15map_l125_m2_e0hetalt
93.3333
87.5000
100.0000
89.8551
71700
jmaeng-gatkINDELI6_15map_l125_m2_e0homalt
96.5517
93.3333
100.0000
93.7778
1411400
jmaeng-gatkINDELI6_15map_l125_m2_e1hetalt
93.3333
87.5000
100.0000
90.1408
71700
jmaeng-gatkINDELI6_15map_l125_m2_e1homalt
96.5517
93.3333
100.0000
93.9655
1411400
jmaeng-gatkINDELI6_15map_l150_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l150_m0_e0homalt
85.7143
75.0000
100.0000
95.6522
31300
jmaeng-gatkINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.8571
30300
jmaeng-gatkINDELI6_15map_l150_m1_e0homalt
92.3077
85.7143
100.0000
96.1538
61600
jmaeng-gatkINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.7500
30300
jmaeng-gatkINDELI6_15map_l150_m2_e0homalt
92.3077
85.7143
100.0000
96.6667
61600
jmaeng-gatkINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
94.0000
30300
jmaeng-gatkINDELI6_15map_l150_m2_e1homalt
93.3333
87.5000
100.0000
96.2366
71700
jmaeng-gatkINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m0_e0homalt
0.0000
100.0000
01000
jmaeng-gatkINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.7778
21200
jmaeng-gatkINDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.9798
21200
jmaeng-gatkINDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
98.0583
21200
jmaeng-gatkINDELI6_15map_sirenhetalt
95.6522
91.6667
100.0000
77.7778
6666600
jmaeng-gatkINDELI6_15segdup*
97.4504
98.2857
96.6292
94.0168
172317260
0.0000
jmaeng-gatkINDELI6_15segduphet
95.9064
98.7952
93.1818
95.3733
8218260
0.0000
jmaeng-gatkINDELI6_15segduphetalt
97.7273
95.5556
100.0000
89.7862
4324300
jmaeng-gatkINDELI6_15segduphomalt
100.0000
100.0000
100.0000
92.7914
4704700
jmaeng-gatkINDELI6_15segdupwithalt*
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15segdupwithalthet
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
jmaeng-gatkINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
jmaeng-gatkINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
jmaeng-gatkINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
jmaeng-gatkSNP*HG002compoundhethetalt
98.9449
97.9118
100.0000
22.9224
8441884400
jmaeng-gatkSNP*decoy*
0.0000
100.0000
00000
jmaeng-gatkSNP*decoyhet
0.0000
100.0000
00000
jmaeng-gatkSNP*decoyhetalt
0.0000
100.0000
00000
jmaeng-gatkSNP*decoyhomalt
0.0000
100.0000
00000
jmaeng-gatkSNP*func_cdshetalt
100.0000
100.0000
100.0000
64.2857
1001000
jmaeng-gatkSNP*func_cdshomalt
99.8852
99.7707
100.0000
21.6496
696316696300
jmaeng-gatkSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
83.3333
1211200
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
94.1176
1501500
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.9067
99.8135
100.0000
43.7478
16063160600