PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
80001-80050 / 86044 show all
jmaeng-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
jmaeng-gatkINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
jmaeng-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9558
10100
jmaeng-gatkINDELD6_15decoyhet
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.2754
10100
jmaeng-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
57.0000
4304300
jmaeng-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
56.0606
2902900
jmaeng-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jmaeng-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
58.6207
1201200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1831
60600
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8102
30300
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.2456
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.6667
84.6154
100.0000
59.7561
3363300
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8723
40400
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3740
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.0000
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.8571
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.3590
100.0000
98.7261
85.0476
155015520
0.0000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0388
7407400
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
90.9091
87.7193
94.3396
99.4917
5075030
0.0000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
88.6076
83.3333
94.5946
99.4061
3573520
0.0000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1758
90900
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
92.3077
100.0000
85.7143
99.7745
60610
0.0000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.1364
98.2877
100.0000
18.5552
5741057500
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
21.1864
9349300
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
40.0000
2102100
jmaeng-gatkINDELD6_15map_l100_m0_e0*
96.6184
97.0874
96.1538
91.7916
100310040
0.0000
jmaeng-gatkINDELD6_15map_l100_m0_e0het
95.9350
98.3333
93.6508
93.1522
5915940
0.0000
jmaeng-gatkINDELD6_15map_l100_m0_e0hetalt
97.2973
94.7368
100.0000
83.4862
1811800
jmaeng-gatkINDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
90.3361
2312300
jmaeng-gatkINDELD6_15map_l100_m1_e0hetalt
95.3846
91.1765
100.0000
74.4856
6266200
jmaeng-gatkINDELD6_15map_l100_m2_e0hetalt
95.3846
91.1765
100.0000
75.6863
6266200
jmaeng-gatkINDELD6_15map_l100_m2_e1hetalt
94.9640
90.4110
100.0000
75.3731
6676600
jmaeng-gatkINDELD6_15map_l125_m0_e0*
96.8421
97.8723
95.8333
94.7996
4614620
0.0000
jmaeng-gatkINDELD6_15map_l125_m0_e0het
94.9153
96.5517
93.3333
95.6459
2812820
0.0000
jmaeng-gatkINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.9091
60600