PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
79951-80000 / 86044 show all
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9919
10100
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
99.8250
99.7812
99.8688
48.1162
22805228330
0.0000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.6155
13300133000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
87.7358
1301300
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
94.6237
89.7959
100.0000
25.4237
4454400
jmaeng-gatkINDELD1_5map_l100_m0_e0hetalt
78.2609
64.2857
100.0000
95.6731
95900
jmaeng-gatkINDELD1_5map_l100_m1_e0hetalt
91.9540
85.1064
100.0000
91.7526
4074000
jmaeng-gatkINDELD1_5map_l100_m2_e0hetalt
90.9091
83.3333
100.0000
92.1905
4084100
jmaeng-gatkINDELD1_5map_l100_m2_e1hetalt
90.3226
82.3529
100.0000
92.0074
4294300
jmaeng-gatkINDELD1_5map_l125_m0_e0hetalt
80.0000
66.6667
100.0000
98.6111
21200
jmaeng-gatkINDELD1_5map_l125_m1_e0hetalt
81.8182
69.2308
100.0000
97.1338
94900
jmaeng-gatkINDELD1_5map_l125_m2_e0hetalt
84.6154
73.3333
100.0000
96.9444
1141100
jmaeng-gatkINDELD1_5map_l125_m2_e1hetalt
84.6154
73.3333
100.0000
97.0027
1141100
jmaeng-gatkINDELD1_5map_l150_m0_e0het
92.5894
98.5149
87.3362
94.7966
1993200290
0.0000
jmaeng-gatkINDELD1_5map_l150_m0_e0hetalt
66.6667
50.0000
100.0000
99.1453
11100
jmaeng-gatkINDELD1_5map_l150_m1_e0hetalt
72.7273
57.1429
100.0000
98.4436
43400
jmaeng-gatkINDELD1_5map_l150_m2_e0hetalt
72.7273
57.1429
100.0000
98.6254
43400
jmaeng-gatkINDELD1_5map_l150_m2_e1hetalt
76.9231
62.5000
100.0000
98.3165
53500
jmaeng-gatkINDELD1_5map_l250_m0_e0*
90.0000
97.8261
83.3333
98.2813
4514590
0.0000
jmaeng-gatkINDELD1_5map_l250_m0_e0het
86.4865
96.9697
78.0488
98.4139
3213290
0.0000
jmaeng-gatkINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3415
1301300
jmaeng-gatkINDELD1_5map_l250_m1_e0hetalt
50.0000
33.3333
100.0000
99.3151
12100
jmaeng-gatkINDELD1_5map_l250_m1_e0homalt
98.2143
96.4912
100.0000
94.4501
5525500
jmaeng-gatkINDELD1_5map_l250_m2_e0hetalt
50.0000
33.3333
100.0000
99.4286
12100
jmaeng-gatkINDELD1_5map_l250_m2_e0homalt
98.3051
96.6667
100.0000
94.8763
5825800
jmaeng-gatkINDELD1_5map_l250_m2_e1hetalt
50.0000
33.3333
100.0000
99.4444
12100
jmaeng-gatkINDELD1_5map_l250_m2_e1homalt
98.3051
96.6667
100.0000
95.0129
5825800
jmaeng-gatkINDELD1_5map_sirenhetalt
92.9936
86.9048
100.0000
91.3507
73117300
jmaeng-gatkINDELD1_5segduphet
95.2904
99.2775
91.6112
96.4890
6875688630
0.0000
jmaeng-gatkINDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.6596
5025100
jmaeng-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9960
10100
jmaeng-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9948
10100
jmaeng-gatkINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5tech_badpromoters*
97.2973
94.7368
100.0000
48.5714
1811800
jmaeng-gatkINDELD1_5tech_badpromotershet
93.3333
87.5000
100.0000
58.8235
71700