PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
79701-79750 / 86044 show all
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50het
99.1706
98.8297
99.5138
43.4464
2449292456120
0.0000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200*
94.1176
100.0000
88.8889
97.0492
80810
0.0000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.4576
60600
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
80.0000
100.0000
66.6667
95.6522
20210
0.0000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtimap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
jpowers-varprowlSNPtimap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
029000
jpowers-varprowlSNPtimap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
030000
jpowers-varprowlSNPtimap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
031000
jpowers-varprowlSNPtimap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlSNPtimap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
024000
jpowers-varprowlSNPtimap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
024000
jpowers-varprowlSNPtimap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
024000
jpowers-varprowlSNPtimap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlSNPtimap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNPtimap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNPtimap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNPtimap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtimap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlSNPtimap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlSNPtimap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlSNPtimap_sirenhetalt
0.0000
0.0000
0.0000
057000
jpowers-varprowlSNPtisegduphetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlSNPtisegdupwithalt*
0.0000
100.0000
00000
jpowers-varprowlSNPtisegdupwithalthet
0.0000
100.0000
00000
jpowers-varprowlSNPtisegdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtisegdupwithalthomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtitech_badpromotershet
94.3820
95.4545
93.3333
56.7308
4224230
0.0000
jpowers-varprowlSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtv*hetalt
0.0000
0.0000
0.0000
0871000
jpowers-varprowlSNPtvHG002complexvarhetalt
0.0000
0.0000
0.0000
0310000
jpowers-varprowlSNPtvHG002compoundhethetalt
0.0000
0.0000
0.0000
0862000
jpowers-varprowlSNPtvdecoy*
0.0000
100.0000
00000
jpowers-varprowlSNPtvdecoyhet
0.0000
100.0000
00000
jpowers-varprowlSNPtvdecoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvdecoyhomalt
0.0000
100.0000
00000