PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
36351-36400 / 86044 show all
jlack-gatkINDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.4895
61600
jlack-gatkINDELD1_5map_l150_m1_e0homalt
99.1150
98.2456
100.0000
86.7690
224422400
jlack-gatkINDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.7612
61600
jlack-gatkINDELD1_5map_l150_m2_e0homalt
99.1667
98.3471
100.0000
87.4803
238423800
jlack-gatkINDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.4359
71700
jlack-gatkINDELD1_5map_l250_m0_e0*
83.0189
95.6522
73.3333
97.9784
44244160
0.0000
jlack-gatkINDELD1_5map_l250_m0_e0het
77.5000
93.9394
65.9574
98.0964
31231160
0.0000
jlack-gatkINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.0721
1301300
jlack-gatkINDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.7273
30300
jlack-gatkINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
93.7916
5615600
jlack-gatkINDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.1132
30300
jlack-gatkINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
94.2774
5915900
jlack-gatkINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.1707
30300
jlack-gatkINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
94.4497
5915900
jlack-gatkINDELD1_5map_sirenhetalt
95.0000
90.4762
100.0000
90.7543
7687600
jlack-gatkINDELD1_5segduphetalt
97.0297
94.2308
100.0000
95.7018
4934900
jlack-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9959
10100
jlack-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9946
10100
jlack-gatkINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5tech_badpromoters*
95.0000
100.0000
90.4762
48.7805
1901920
0.0000
jlack-gatkINDELD1_5tech_badpromotershet
88.8889
100.0000
80.0000
56.5217
80820
0.0000
jlack-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
jlack-gatkINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
jlack-gatkINDELD6_15decoy*
66.6667
100.0000
50.0000
99.9115
10110
0.0000
jlack-gatkINDELD6_15decoyhet
0.0000
0.0000
99.9476
00010
0.0000
jlack-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1736
10100
jlack-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
jlack-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
57.8431
4304300
jlack-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
57.3529
2902900
jlack-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jlack-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
58.6207
1201200
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.0588
60600
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8417
30300
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.7778
10100
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.6667
84.6154
100.0000
58.7500
3363300
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.7401
40400
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3740
20200
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8544
100.0000
99.7093
57.3201
343034310
0.0000
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.8571
20200
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
93.7500
10100
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
jlack-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000