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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 564 565 566 567 568 569 570 571 572 ... 1720 1721 » 28351-28400 / 86044 show all
ckim-vqsr	INDEL	D6_15	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	92.7928	8	0	8	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e0	homalt	98.1818	96.4286	100.0000	90.2527	27	1	27	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	*	96.4706	96.4706	96.4706	94.3296	82	3	82	3	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	het	95.8333	97.8723	93.8776	95.5616	46	1	46	3	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	hetalt	94.1176	88.8889	100.0000	92.9825	8	1	8	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	homalt	98.2456	96.5517	100.0000	90.0356	28	1	28	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	*	100.0000	100.0000	100.0000	98.5782	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	het	100.0000	100.0000	100.0000	98.7179	4	0	4	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.4684	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	*	100.0000	100.0000	100.0000	97.7011	18	0	18	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	het	100.0000	100.0000	100.0000	98.1034	11	0	11	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.6667	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	homalt	100.0000	100.0000	100.0000	96.5035	5	0	5	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	*	100.0000	100.0000	100.0000	97.5637	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	het	100.0000	100.0000	100.0000	97.8979	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	97.2973	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	homalt	100.0000	100.0000	100.0000	96.3190	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	*	100.0000	100.0000	100.0000	97.6293	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	het	100.0000	100.0000	100.0000	97.9622	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	96.3855	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_siren	hetalt	96.8750	93.9394	100.0000	75.7180	93	6	93	0	0
ckim-vqsr	INDEL	D6_15	map_siren	homalt	98.4496	97.6923	99.2188	84.0994	127	3	127	1	0	0.0000
ckim-vqsr	INDEL	D6_15	segdup	het	96.7391	96.7391	96.7391	96.5939	89	3	89	3	0	0.0000
ckim-vqsr	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4968	44	5	44	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	51.4286	17	0	17	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	52.3810	10	0	10	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	het	98.7823	97.5940	100.0000	64.8679	649	16	625	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	*	95.6522	91.6667	100.0000	77.5510	11	1	11	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	70.0000	9	0	9	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.8838	90.5263	97.5000	91.3886	86	9	78	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.1677	87.2093	100.0000	76.4205	75	11	83	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	95.7346	93.5185	98.0583	89.8322	101	7	101	2	0	0.0000

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