PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
27151-27200 / 86044 show all
dgrover-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8571
30300
dgrover-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
dgrover-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.0392
10100
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
57.6471
3633600
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8022
40400
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3607
20200
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8665
100.0000
99.7333
59.4595
374037410
0.0000
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8544
100.0000
99.7093
57.0537
343034310
0.0000
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.8571
20200
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
94.4444
10100
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
dgrover-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.6785
100.0000
99.3590
84.3058
155015510
0.0000
dgrover-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.9951
7407400
dgrover-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
93.8053
92.9825
94.6429
99.4760
5345330
0.0000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSmap_l100_m0_e0*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSmap_l100_m0_e0het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
00000