PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
20551-20600 / 86044 show all
gduggal-bwavardSNP*map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
043000
gduggal-bwavardSNP*map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardSNP*map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNP*map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNP*map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNP*map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardSNP*map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNP*map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNP*map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardSNP*map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNP*map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNP*map_sirenhetalt
0.0000
1.2346
0.0000
0.0000
180000
gduggal-bwavardSNP*segduphetalt
0.0000
0.0000
0.0000
07000
gduggal-bwavardSNP*segdupwithalt*
0.0000
100.0000
00000
gduggal-bwavardSNP*segdupwithalthet
0.0000
100.0000
00000
gduggal-bwavardSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*tech_badpromotershomalt
93.3333
87.5000
100.0000
42.8571
70106800
gduggal-bwavardSNPti*hetalt
0.0000
1.0309
0.0000
0.0000
6576000
gduggal-bwavardSNPtiHG002complexvarhetalt
0.0000
2.8986
0.0000
0.0000
6201000
gduggal-bwavardSNPtiHG002compoundhethetalt
0.0000
1.0363
0.0000
0.0000
6573000
gduggal-bwavardSNPtidecoy*
0.0000
0.0000
100.0000
99.9987
00200
gduggal-bwavardSNPtidecoyhet
0.0000
100.0000
00000
gduggal-bwavardSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtidecoyhomalt
0.0000
0.0000
100.0000
99.9898
00200
gduggal-bwavardSNPtifunc_cdshetalt
0.0000
0.0000
0.0000
08000
gduggal-bwavardSNPtifunc_cdshomalt
99.6099
99.2227
100.0000
20.4486
523441521300
gduggal-bwavardSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
06000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
012000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.4241
96.8972
100.0000
48.3349
109335108600
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
98.6524
97.4079
99.9291
42.5020
142838141010
0.0000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.1183
98.3683
99.8798
44.5703
8441483110
0.0000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000