PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
19201-19250 / 86044 show all
astatham-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
astatham-gatkINDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.0297
60600
astatham-gatkINDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.5806
60600
astatham-gatkINDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.6378
60600
astatham-gatkINDEL*map_sirenhetalt
96.8685
93.9271
100.0000
86.9855
2321523400
astatham-gatkINDEL*segduphetalt
96.8254
93.8462
100.0000
94.7122
122812400
astatham-gatkINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9974
10100
astatham-gatkINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9960
10100
astatham-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
astatham-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
astatham-gatkINDEL*tech_badpromoters*
99.3377
98.6842
100.0000
55.0898
7517500
astatham-gatkINDEL*tech_badpromotershet
98.7013
97.4359
100.0000
53.6585
3813800
astatham-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
astatham-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
astatham-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000