PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
1651-1700 / 86044 show all
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
81.2500
1201200
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.1176
10100
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200*
89.6552
81.2500
100.0000
97.7816
1331300
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200het
82.3529
70.0000
100.0000
98.2544
73700
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.7391
60600
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.7778
20200
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
83.3333
10100
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200*
90.2174
82.1782
100.0000
93.4543
83188300
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200het
86.2069
75.7576
100.0000
94.2661
50165000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
97.0588
94.2857
100.0000
91.6667
3323300
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_11to50het
99.6360
99.4350
99.8379
27.9708
246414246340
0.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200*
93.3333
87.5000
100.0000
94.4882
71700
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200het
90.9091
83.3333
100.0000
94.1860
51500
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
95.1220
20200
raldana-dualsentieonSNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
69.2308
80800
raldana-dualsentieonSNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
58.6207
2402400
raldana-dualsentieonSNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
65.2174
2402400
raldana-dualsentieonSNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
65.7143
2402400
raldana-dualsentieonSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
30300
raldana-dualsentieonSNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
66.6667
1501500
raldana-dualsentieonSNPtimap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
70.5882
1501500
raldana-dualsentieonSNPtimap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
71.1538
1501500
raldana-dualsentieonSNPtimap_l250_m0_e0het
96.7570
97.4304
96.0929
92.6538
91024910370
0.0000
raldana-dualsentieonSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
80.9524
40400
raldana-dualsentieonSNPtimap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
78.2609
50500
raldana-dualsentieonSNPtimap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
79.1667
50500
raldana-dualsentieonSNPtisegduphetalt
100.0000
100.0000
100.0000
98.3333
20200
raldana-dualsentieonSNPtisegdupwithalt*
0.0000
100.0000
00000
raldana-dualsentieonSNPtisegdupwithalthet
0.0000
100.0000
00000
raldana-dualsentieonSNPtisegdupwithalthetalt
0.0000
100.0000
00000