PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
15151-15200 / 86044 show all
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.7464
99.5570
99.9365
52.5475
15737157310
0.0000
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.9417
99.8834
100.0000
46.5044
857185700
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
97.7778
95.6522
100.0000
90.3084
6636600
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.0909
98.1982
100.0000
84.6695
436843600
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.3430
98.6945
100.0000
83.5150
378537800
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.0000
20200
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
83.0986
1201200
astatham-gatkSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.7368
10100
astatham-gatkSNPtilowcmp_SimpleRepeat_diTR_11to50homalt
99.7327
99.4668
100.0000
64.1699
16799167900
astatham-gatkSNPtilowcmp_SimpleRepeat_diTR_51to200*
96.7742
93.7500
100.0000
97.8510
1511500
astatham-gatkSNPtilowcmp_SimpleRepeat_diTR_51to200het
94.7368
90.0000
100.0000
98.2857
91900
astatham-gatkSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.5116
60600
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_6to10het
99.4684
98.9668
99.9751
45.9140
402342402310
0.0000
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
83.3333
10100
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
99.9498
99.8997
100.0000
34.2631
39834398300
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
92.3077
85.7143
100.0000
92.9245
3053000
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_11to50het
99.2683
98.5472
100.0000
30.9086
244236244100
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
94.5578
80800
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.9412
60600
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7742
20200
astatham-gatkSNPtimap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
65.0000
1401400
astatham-gatkSNPtimap_l100_m1_e0hetalt
100.0000
100.0000
100.0000
68.1319
2902900
astatham-gatkSNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
69.6970
3003000
astatham-gatkSNPtimap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
69.0000
3103100
astatham-gatkSNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
71.4286
80800
astatham-gatkSNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
64.1791
2402400
astatham-gatkSNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
70.0000
2402400
astatham-gatkSNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
70.0000
2402400
astatham-gatkSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
85.0000
30300