PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1101-1150 / 86044 show all | |||||||||||||||
raldana-dualsentieon | INDEL | D6_15 | map_l150_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 87.5556 | 28 | 0 | 28 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l150_m2_e1 | * | 97.5904 | 95.2941 | 100.0000 | 89.8113 | 81 | 4 | 81 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l150_m2_e1 | het | 97.8261 | 95.7447 | 100.0000 | 91.0180 | 45 | 2 | 45 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l150_m2_e1 | hetalt | 87.5000 | 77.7778 | 100.0000 | 89.2308 | 7 | 2 | 7 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l150_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 87.3362 | 29 | 0 | 29 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 96.9388 | 6 | 0 | 6 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 96.8254 | 4 | 0 | 4 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.4286 | 2 | 0 | 2 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m1_e0 | * | 100.0000 | 100.0000 | 100.0000 | 95.1743 | 18 | 0 | 18 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m1_e0 | het | 100.0000 | 100.0000 | 100.0000 | 95.4357 | 11 | 0 | 11 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 93.5484 | 2 | 0 | 2 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 95.0495 | 5 | 0 | 5 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e0 | * | 100.0000 | 100.0000 | 100.0000 | 94.9074 | 22 | 0 | 22 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e0 | het | 100.0000 | 100.0000 | 100.0000 | 94.9640 | 14 | 0 | 14 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 94.5946 | 2 | 0 | 2 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 94.8718 | 6 | 0 | 6 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e1 | * | 100.0000 | 100.0000 | 100.0000 | 95.0339 | 22 | 0 | 22 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e1 | het | 100.0000 | 100.0000 | 100.0000 | 95.0877 | 14 | 0 | 14 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 94.7368 | 2 | 0 | 2 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 95.0000 | 6 | 0 | 6 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | map_siren | hetalt | 95.7895 | 91.9192 | 100.0000 | 72.3404 | 91 | 8 | 91 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | segdup | het | 96.6292 | 93.4783 | 100.0000 | 93.7591 | 86 | 6 | 86 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | segdup | hetalt | 92.3077 | 85.7143 | 100.0000 | 88.8298 | 42 | 7 | 42 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | D6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | D6_15 | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | D6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | D6_15 | tech_badpromoters | * | 90.3226 | 82.3529 | 100.0000 | 54.8387 | 14 | 3 | 14 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | tech_badpromoters | het | 82.3529 | 70.0000 | 100.0000 | 58.8235 | 7 | 3 | 7 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | tech_badpromoters | hetalt | 100.0000 | 100.0000 | 100.0000 | 0.0000 | 1 | 0 | 1 | 0 | 0 | ||
raldana-dualsentieon | INDEL | D6_15 | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 53.8462 | 6 | 0 | 6 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | HG002complexvar | hetalt | 95.6386 | 91.6418 | 100.0000 | 68.0583 | 307 | 28 | 329 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | HG002compoundhet | hetalt | 94.2662 | 89.1543 | 100.0000 | 44.8215 | 1866 | 227 | 1886 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | func_cds | * | 90.9091 | 83.3333 | 100.0000 | 72.2222 | 10 | 2 | 10 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | func_cds | het | 94.1176 | 88.8889 | 100.0000 | 57.8947 | 8 | 1 | 8 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | func_cds | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 86.6667 | 2 | 0 | 2 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | het | 92.7807 | 89.4737 | 96.3415 | 89.6985 | 85 | 10 | 79 | 3 | 0 | 0.0000 | |
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | hetalt | 92.5000 | 86.0465 | 100.0000 | 77.2080 | 74 | 12 | 80 | 0 | 0 | ||
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | * | 96.7136 | 95.3704 | 98.0952 | 88.4995 | 103 | 5 | 103 | 2 | 0 | 0.0000 | |
raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | het | 95.3357 | 93.9394 | 96.7742 | 87.8431 | 62 | 4 | 60 | 2 | 0 | 0.0000 |