PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 18 19 20 21 22 23 24 25 26 ... 1720 1721 » 1051-1100 / 86044 show all
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.3984	94.9288	100.0000	24.8387	4530	242	4542	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	83.1099	71.1009	100.0000	26.0069	620	252	643	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.4329	98.8722	100.0000	81.0382	263	3	263	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.0228	98.0645	100.0000	82.9213	152	3	152	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	60.2151	37	0	37	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	100.0000	100.0000	100.0000	81.6832	74	0	74	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	86.2745	77.1930	97.7778	99.5198	44	13	44	1	0	0.0000
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	81.6901	69.0476	100.0000	99.4796	29	13	29	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.0217	9	0	9	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	92.3077	100.0000	85.7143	99.7569	6	0	6	1	0	0.0000
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.1898	98.3926	100.0000	27.0507	1163	19	1165	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5701	99.1438	100.0000	17.6136	579	5	580	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.8947	95.8763	100.0000	21.1864	93	4	93	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	38.2353	21	0	21	0	0
raldana-dualsentieon	INDEL	D6_15	map_l100_m0_e0	*	97.0588	96.1165	98.0198	86.6755	99	4	99	2	0	0.0000
raldana-dualsentieon	INDEL	D6_15	map_l100_m0_e0	het	97.5207	98.3333	96.7213	87.5000	59	1	59	2	0	0.0000
raldana-dualsentieon	INDEL	D6_15	map_l100_m0_e0	hetalt	94.4444	89.4737	100.0000	76.7123	17	2	17	0	0
raldana-dualsentieon	INDEL	D6_15	map_l100_m0_e0	homalt	97.8723	95.8333	100.0000	88.3249	23	1	23	0	0
raldana-dualsentieon	INDEL	D6_15	map_l100_m1_e0	hetalt	94.5736	89.7059	100.0000	66.6667	61	7	61	0	0
raldana-dualsentieon	INDEL	D6_15	map_l100_m2_e0	hetalt	94.5736	89.7059	100.0000	68.5567	61	7	61	0	0
raldana-dualsentieon	INDEL	D6_15	map_l100_m2_e1	hetalt	94.2029	89.0411	100.0000	68.7500	65	8	65	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m0_e0	*	97.8261	95.7447	100.0000	91.1417	45	2	45	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m0_e0	het	98.2456	96.5517	100.0000	91.5916	28	1	28	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m0_e0	hetalt	90.9091	83.3333	100.0000	86.8421	5	1	5	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	91.2409	12	0	12	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m1_e0	hetalt	94.4444	89.4737	100.0000	79.2683	17	2	17	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m1_e0	homalt	100.0000	100.0000	100.0000	86.7188	34	0	34	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m2_e0	hetalt	94.4444	89.4737	100.0000	81.5217	17	2	17	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m2_e0	homalt	100.0000	100.0000	100.0000	87.0504	36	0	36	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m2_e1	hetalt	91.8919	85.0000	100.0000	82.2917	17	3	17	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m2_e1	homalt	100.0000	100.0000	100.0000	87.0629	37	0	37	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m0_e0	*	98.4127	96.8750	100.0000	92.4020	31	1	31	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m0_e0	het	100.0000	100.0000	100.0000	92.4812	20	0	20	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m0_e0	hetalt	88.8889	80.0000	100.0000	87.5000	4	1	4	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m0_e0	homalt	100.0000	100.0000	100.0000	93.6364	7	0	7	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m1_e0	*	98.6111	97.2603	100.0000	89.8281	71	2	71	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m1_e0	het	98.7013	97.4359	100.0000	91.4607	38	1	38	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m1_e0	hetalt	93.3333	87.5000	100.0000	87.2727	7	1	7	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m1_e0	homalt	100.0000	100.0000	100.0000	86.8687	26	0	26	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m2_e0	*	98.1366	96.3415	100.0000	89.8718	79	3	79	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m2_e0	het	97.7778	95.6522	100.0000	91.0751	44	2	44	0	0
raldana-dualsentieon	INDEL	D6_15	map_l150_m2_e0	hetalt	93.3333	87.5000	100.0000	88.7097	7	1	7	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge