PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
10001-10050 / 86044 show all
jpowers-varprowlINDELD1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
047000
jpowers-varprowlINDELD1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
048000
jpowers-varprowlINDELD1_5map_l100_m2_e1hetalt
0.0000
1.9608
0.0000
0.0000
150000
jpowers-varprowlINDELD1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
013000
jpowers-varprowlINDELD1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlINDELD1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlINDELD1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
07000
jpowers-varprowlINDELD1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
07000
jpowers-varprowlINDELD1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5map_l250_m0_e0homalt
91.6667
84.6154
100.0000
97.0976
1121100
jpowers-varprowlINDELD1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_sirenhetalt
0.0000
0.0000
0.0000
084000
jpowers-varprowlINDELD1_5segduphetalt
0.0000
1.9231
0.0000
0.0000
151000
jpowers-varprowlINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9938
10100
jpowers-varprowlINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9920
10100
jpowers-varprowlINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD1_5tech_badpromotershomalt
80.0000
66.6667
100.0000
40.0000
63600
jpowers-varprowlINDELD6_15*hetalt
0.0000
0.3793
0.0000
0.0000
318143000
jpowers-varprowlINDELD6_15HG002complexvarhetalt
0.0000
1.5795
0.0000
0.0000
16997000
jpowers-varprowlINDELD6_15HG002compoundhethetalt
0.0000
0.3803
0.0000
0.0000
318120000
jpowers-varprowlINDELD6_15decoyhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD6_15decoyhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15func_cdshomalt
80.0000
66.6667
100.0000
60.0000
84800
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.2959
0.0000
0.0000
72359000
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.4110
0.0000
0.0000
286784000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.3847
0.0000
0.0000
318028000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
039000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
99.0521
22200
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8304
20200
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.8182
0.0000
0.0000
154000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
3.0303
0.0000
0.0000
132000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.2342
0.0000
0.0000
41704000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.3515
0.0000
0.0000
257087000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.3862
0.0000
0.0000
215417000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.3485
0.0000
0.0000
257149000
jli-customINDELC16_PLUSsegduphomalt
0.0000
0.0000
0.0000
00000