PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
7501-7550 / 86044 show all
mlin-fermikitINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUSmap_l250_m1_e0*
50.0000
50.0000
50.0000
95.7895
22220
0.0000
mlin-fermikitINDELD16_PLUSmap_l250_m1_e0het
33.3333
33.3333
33.3333
94.0000
12120
0.0000
mlin-fermikitINDELD16_PLUSmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUSmap_l250_m2_e0*
54.5455
60.0000
50.0000
95.0820
32330
0.0000
mlin-fermikitINDELD16_PLUSmap_l250_m2_e0het
28.5714
33.3333
25.0000
94.0299
12130
0.0000
mlin-fermikitINDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
98.0392
10100
mlin-fermikitINDELD16_PLUSmap_l250_m2_e1*
54.5455
60.0000
50.0000
95.1613
32330
0.0000
mlin-fermikitINDELD16_PLUSmap_l250_m2_e1het
28.5714
33.3333
25.0000
94.2029
12130
0.0000
mlin-fermikitINDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
98.0392
10100
mlin-fermikitINDELD16_PLUSmap_sirenhetalt
66.6667
51.6129
94.1176
83.1683
16151610
0.0000
mlin-fermikitINDELD16_PLUSsegduphetalt
61.5385
44.4444
100.0000
92.9412
45600
mlin-fermikitINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitINDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
50.0000
40400
mlin-fermikitINDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
mlin-fermikitINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9120
40400
mlin-fermikitINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9287
20200
mlin-fermikitINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.4595
10100
mlin-fermikitINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9357
10100
mlin-fermikitINDELD1_5func_cdshet
98.8235
98.8235
98.8235
29.7521
8418410
0.0000
mlin-fermikitINDELD1_5func_cdshetalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
85.7143
75.0000
100.0000
99.1379
62600
mlin-fermikitINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.7742
10100
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
77.8761
63.7681
100.0000
58.0952
44254400
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
92.3077
85.7143
100.0000
99.0964
61600
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
89.5522
81.0811
100.0000
77.2201
60145900
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
91.1765
83.7838
100.0000
84.4560
3163000
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
01000
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
56.8282
39.6923
100.0000
35.3808
25839226300
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
51.5152
34.6939
100.0000
32.0000
17321700
mlin-fermikitINDELD1_5map_l100_m0_e0hetalt
66.6667
50.0000
100.0000
90.4110
77700
mlin-fermikitINDELD1_5map_l100_m1_e0hetalt
63.7681
46.8085
100.0000
89.1089
22252200
mlin-fermikitINDELD1_5map_l100_m2_e0hetalt
62.8571
45.8333
100.0000
89.5928
22262300