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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1378 1379 1380 1381 1382 1383 1384 1385 1386 ... 1720 1721 » 69051-69100 / 86044 show all
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.8537	97.8565	99.8715	37.6633	10135	222	10103	13	13	100.0000
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.3348	99.0173	99.6544	63.3928	27406	272	27397	95	13	13.6842
rpoplin-dv42	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	76.0523	82.0000	70.9091	81.7276	41	9	39	16	13	81.2500
rpoplin-dv42	INDEL	*	map_l125_m1_e0	*	98.0229	97.5795	98.4704	98.6389	2056	51	2060	32	13	40.6250
rpoplin-dv42	INDEL	*	map_l125_m2_e0	*	98.0800	97.6321	98.5321	98.7156	2144	52	2148	32	13	40.6250
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	97.6891	96.9760	98.4127	66.3940	930	29	930	15	13	86.6667
raldana-dualsentieon	INDEL	I1_5	HG002complexvar	het	99.3867	98.9004	99.8777	56.7573	17989	200	17970	22	13	59.0909
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	89.5349	93.9024	85.5556	75.6098	77	5	77	13	13	100.0000
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.3707	95.9702	98.8127	71.1458	1548	65	1498	18	13	72.2222
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	97.9951	96.7873	99.2334	74.5777	2380	79	2330	18	13	72.2222
rpoplin-dv42	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	88.3660	81.6425	96.2963	68.1777	338	76	338	13	13	100.0000
rpoplin-dv42	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	96.7283	98.2659	95.2381	69.3299	340	6	340	17	13	76.4706
rpoplin-dv42	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.0325	97.2835	98.7931	73.7259	1146	32	1146	14	13	92.8571
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	94.8557	91.6364	98.3095	69.4841	756	69	756	13	13	100.0000
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	94.8557	91.6364	98.3095	69.4841	756	69	756	13	13	100.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.2751	99.6037	98.9488	87.5654	1508	6	1506	16	13	81.2500
rpoplin-dv42	SNP	*	map_l250_m2_e1	homalt	98.7018	97.9029	99.5138	87.8305	2661	57	2661	13	13	100.0000
rpoplin-dv42	SNP	ti	map_l250_m0_e0	*	97.8365	97.3723	98.3051	92.1397	1334	36	1334	23	13	56.5217
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	*	99.6705	99.6705	99.6705	66.2895	4840	16	4840	16	13	81.2500
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	99.6119	99.7409	99.4832	68.3306	3080	8	3080	16	13	81.2500
ltrigg-rtg2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.4163	99.3280	99.5048	58.5822	3252	22	3215	16	13	81.2500
ltrigg-rtg2	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	*	90.0602	82.8959	98.5801	34.3105	979	202	972	14	13	92.8571
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	89.1830	82.6962	96.7742	67.5635	411	86	420	14	13	92.8571
ltrigg-rtg2	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	95.7010	93.8654	97.6098	62.3325	1729	113	1756	43	13	30.2326
ltrigg-rtg2	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.8029	98.7545	98.8513	71.4513	6026	76	6024	70	13	18.5714
ltrigg-rtg2	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	98.3982	97.2756	99.5471	54.5040	3035	85	3077	14	13	92.8571
ltrigg-rtg2	SNP	*	HG002compoundhet	het	99.2921	98.9773	99.6090	42.0270	14033	145	14011	55	13	23.6364
mlin-fermikit	INDEL	D1_5	segdup	het	97.3152	96.9653	97.6676	91.5120	671	21	670	16	13	81.2500
mlin-fermikit	INDEL	D6_15	HG002compoundhet	hetalt	78.2401	64.3602	99.7528	23.4532	5246	2905	5245	13	13	100.0000
mlin-fermikit	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	77.7879	63.7655	99.7160	28.7405	4535	2577	4564	13	13	100.0000
mlin-fermikit	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	77.6790	63.6186	99.7178	29.4964	4564	2610	4593	13	13	100.0000
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	50.9091	51.8519	50.0000	88.3929	14	13	13	13	13	100.0000
mlin-fermikit	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	83.8710	95.1220	75.0000	87.3786	39	2	39	13	13	100.0000
mlin-fermikit	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	97.8956	97.3822	98.4144	74.9934	930	25	931	15	13	86.6667
mlin-fermikit	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	91.2698	88.4298	94.2982	65.0842	214	28	215	13	13	100.0000
mlin-fermikit	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	87.3343	83.8710	91.0959	81.8408	130	25	133	13	13	100.0000
mlin-fermikit	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.1226	96.8012	99.4807	58.3241	34286	1133	34292	179	13	7.2626
mlin-fermikit	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	88.2477	83.3900	93.7063	86.7826	1471	293	1474	99	13	13.1313
mlin-fermikit	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.2635	100.0000	96.5863	56.1233	481	0	481	17	13	76.4706
ndellapenna-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.1754	99.4737	98.8789	38.7923	1323	7	1323	15	13	86.6667
ltrigg-rtg2	SNP	ti	HG002compoundhet	*	99.3879	98.9873	99.7918	33.3089	17301	177	17255	36	13	36.1111
ltrigg-rtg2	SNP	ti	map_l100_m2_e0	homalt	99.8031	99.6778	99.9288	59.8461	18250	59	18249	13	13	100.0000
ltrigg-rtg2	SNP	ti	map_l100_m2_e1	homalt	99.8051	99.6810	99.9295	59.8306	18435	59	18434	13	13	100.0000
mlin-fermikit	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	*	70.4000	64.7059	77.1930	96.8784	44	24	44	13	13	100.0000
mlin-fermikit	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	67.4157	65.2174	69.7674	63.8655	30	16	30	13	13	100.0000
mlin-fermikit	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	97.1544	99.6124	94.8148	60.2941	257	1	256	14	13	92.8571
mlin-fermikit	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	77.3563	63.1748	99.7477	25.6850	5114	2981	5140	13	13	100.0000
mlin-fermikit	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	77.4004	63.2326	99.7503	28.0442	5168	3005	5193	13	13	100.0000
mlin-fermikit	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	82.8097	70.7958	99.7345	26.8052	4875	2011	4883	13	13	100.0000
qzeng-custom	SNP	*	map_l250_m1_e0	homalt	73.6061	58.5465	99.0960	88.7560	1442	1021	1425	13	13	100.0000

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