PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
6451-6500 / 86044 show all | |||||||||||||||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_6to10 | homalt | 42.4779 | 75.0000 | 29.6296 | 79.2308 | 3 | 1 | 8 | 19 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 95.5752 | 0 | 0 | 0 | 15 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 94.4444 | 0 | 0 | 0 | 11 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 96.3636 | 0 | 0 | 0 | 4 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 72.2222 | 56.5217 | 100.0000 | 76.0000 | 13 | 10 | 6 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 0.0000 | 0.0000 | 33.3333 | 89.2857 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 91.6667 | 84.6154 | 100.0000 | 44.1860 | 11 | 2 | 48 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | * | 66.6667 | 50.0000 | 100.0000 | 77.7778 | 2 | 2 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | het | 0.0000 | 0.0000 | 100.0000 | 75.0000 | 0 | 2 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 2 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m0_e0 | * | 65.3061 | 72.7273 | 59.2593 | 88.7967 | 8 | 3 | 16 | 11 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m0_e0 | het | 74.5902 | 87.5000 | 65.0000 | 88.2353 | 7 | 1 | 13 | 7 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 92.8571 | 0 | 1 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 40.0000 | 50.0000 | 33.3333 | 89.4737 | 1 | 1 | 2 | 4 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m1_e0 | * | 53.3873 | 61.5385 | 47.1429 | 81.9588 | 16 | 10 | 33 | 37 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m1_e0 | het | 54.2158 | 72.2222 | 43.3962 | 80.2974 | 13 | 5 | 23 | 30 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 88.0000 | 0 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 54.5455 | 60.0000 | 50.0000 | 85.1064 | 3 | 2 | 7 | 7 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e0 | * | 52.5373 | 61.5385 | 45.8333 | 82.9384 | 16 | 10 | 33 | 39 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e0 | het | 52.9672 | 72.2222 | 41.8182 | 80.8362 | 13 | 5 | 23 | 32 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 90.0000 | 0 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e0 | homalt | 54.5455 | 60.0000 | 50.0000 | 86.6667 | 3 | 2 | 7 | 7 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e1 | * | 52.5373 | 61.5385 | 45.8333 | 83.1382 | 16 | 10 | 33 | 39 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e1 | het | 52.9672 | 72.2222 | 41.8182 | 81.0345 | 13 | 5 | 23 | 32 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 90.3226 | 0 | 3 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l100_m2_e1 | homalt | 54.5455 | 60.0000 | 50.0000 | 86.7925 | 3 | 2 | 7 | 7 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m0_e0 | * | 61.5385 | 66.6667 | 57.1429 | 92.6316 | 4 | 2 | 8 | 6 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m0_e0 | het | 80.0000 | 100.0000 | 66.6667 | 93.2836 | 3 | 0 | 6 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 44.4444 | 50.0000 | 40.0000 | 88.6364 | 1 | 1 | 2 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m1_e0 | * | 68.2927 | 66.6667 | 70.0000 | 89.5105 | 10 | 5 | 21 | 9 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m1_e0 | het | 84.2105 | 88.8889 | 80.0000 | 89.9497 | 8 | 1 | 16 | 4 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 90.9091 | 0 | 3 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 48.0000 | 66.6667 | 37.5000 | 87.6923 | 2 | 1 | 3 | 5 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e0 | * | 66.6667 | 66.6667 | 66.6667 | 89.5899 | 10 | 5 | 22 | 11 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e0 | het | 80.0000 | 88.8889 | 72.7273 | 89.8618 | 8 | 1 | 16 | 6 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 92.0000 | 0 | 3 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e0 | homalt | 53.3333 | 66.6667 | 44.4444 | 88.0000 | 2 | 1 | 4 | 5 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e1 | * | 66.6667 | 66.6667 | 66.6667 | 89.6875 | 10 | 5 | 22 | 11 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e1 | het | 80.0000 | 88.8889 | 72.7273 | 89.9083 | 8 | 1 | 16 | 6 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 92.3077 | 0 | 3 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | map_l125_m2_e1 | homalt | 53.3333 | 66.6667 | 44.4444 | 88.1579 | 2 | 1 | 4 | 5 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l150_m0_e0 | * | 73.1707 | 75.0000 | 71.4286 | 95.5975 | 3 | 1 | 5 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | I16_PLUS | map_l150_m0_e0 | het | 75.0000 | 100.0000 | 60.0000 | 95.5357 | 2 | 0 | 3 | 2 | 0 | 0.0000 | |