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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1164 1165 1166 1167 1168 1169 1170 1171 1172 ... 1720 1721 » 58351-58400 / 86044 show all
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.0605	98.2598	99.8745	43.2288	1581	28	1591	2	2	100.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.8470	99.8221	99.8718	54.9751	6173	11	6232	8	2	25.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.8231	99.8474	99.7988	56.7435	3925	6	3969	8	2	25.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.8842	99.9226	99.8459	59.1543	3875	3	3887	6	2	33.3333
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8801	100.0000	99.7606	60.2222	2494	0	2500	6	2	33.3333
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	97.0388	96.6321	97.4490	90.6108	373	13	382	10	2	20.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	97.8197	96.7391	98.9247	90.8824	267	9	276	3	2	66.6667
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9481	99.9259	99.9703	34.6642	6740	5	6740	2	2	100.0000
ckim-dragen	SNP	*	map_siren	hetalt	97.5610	98.7654	96.3855	74.6177	80	1	80	3	2	66.6667
ckim-dragen	SNP	*	tech_badpromoters	*	98.0769	97.4522	98.7097	43.8406	153	4	153	2	2	100.0000
ckim-dragen	SNP	*	tech_badpromoters	homalt	98.1366	98.7500	97.5309	47.4026	79	1	79	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	98.8879	97.9575	99.8361	58.2906	1199	25	1218	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.7983	98.3069	99.2946	51.3464	1800	31	1830	13	2	15.3846
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.9274	98.0496	99.8211	42.1025	1106	22	1116	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.7514	97.9730	99.5423	84.3201	435	9	435	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.9501	98.4334	99.4723	83.2597	377	6	377	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.6736	99.4668	99.8812	64.0938	1679	9	1682	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8403	99.9262	99.7545	48.2662	4062	3	4063	10	2	20.0000
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.6674	99.7924	99.5426	42.2165	6730	14	6747	31	2	6.4516
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9373	99.9248	99.9498	33.3890	3984	3	3984	2	2	100.0000
cchapple-custom	INDEL	*	map_l250_m1_e0	het	90.8928	93.6842	88.2629	95.8219	178	12	188	25	2	8.0000
cchapple-custom	INDEL	*	map_l250_m2_e0	het	91.3070	94.2857	88.5106	96.0027	198	12	208	27	2	7.4074
cchapple-custom	INDEL	*	map_l250_m2_e1	het	91.3456	94.3128	88.5593	96.0927	199	12	209	27	2	7.4074
cchapple-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*		0.0000	0.0000	98.0645	0	0	0	3	2	66.6667
cchapple-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het		0.0000	0.0000	97.2973	0	0	0	3	2	66.6667
cchapple-custom	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000	0.0000	98.3051	0	0	0	2	2	100.0000
cchapple-custom	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	97.6190	0	0	0	2	2	100.0000
cchapple-custom	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	0.0000	0.0000	61.2903	93.6214	0	0	19	12	2	16.6667
cchapple-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	0.0000	0.0000	82.0276	96.1532	0	1	178	39	2	5.1282
cchapple-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	0.0000	0.0000	56.2500	94.0520	0	0	9	7	2	28.5714
cchapple-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	0.0000	0.0000	74.7664	96.5316	0	0	80	27	2	7.4074
cchapple-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	0.0000	0.0000	80.4196	96.5011	0	0	115	28	2	7.1429
cchapple-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	0.0000	0.0000	82.0276	96.1532	0	1	178	39	2	5.1282
cchapple-custom	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	*	0.0000	0.0000	84.7368	95.3466	0	0	161	29	2	6.8966
cchapple-custom	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	het	0.0000	0.0000	80.6667	95.5264	0	0	121	29	2	6.8966
cchapple-custom	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	98.8610	100.0000	97.7477	93.4222	1	0	217	5	2	40.0000
cchapple-custom	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	98.3498	100.0000	96.7532	93.7525	1	0	149	5	2	40.0000
cchapple-custom	INDEL	C1_5	map_l150_m0_e0	*	0.0000	0.0000	55.5556	97.1787	0	0	5	4	2	50.0000
cchapple-custom	INDEL	C1_5	map_l150_m0_e0	het	0.0000	0.0000	42.8571	97.1660	0	0	3	4	2	50.0000
cchapple-custom	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	0.0000	0.0000	72.2222	96.5714	0	0	13	5	2	40.0000
cchapple-custom	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	0.0000	0.0000	68.7500	96.2963	0	0	11	5	2	40.0000
cchapple-custom	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	*	0.0000	0.0000	83.3333	92.5000	0	0	10	2	2	100.0000
cchapple-custom	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	het	0.0000	0.0000	77.7778	92.8571	0	0	7	2	2	100.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	98.4644	97.8261	99.1111	60.3873	225	5	223	2	2	100.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het	83.6066	75.0000	94.4444	59.5506	6	2	34	2	2	100.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	11.7647	13	0	13	2	2	100.0000
cchapple-custom	INDEL	D16_PLUS	map_l100_m1_e0	homalt	75.0000	80.0000	70.5882	91.0995	12	3	12	5	2	40.0000
cchapple-custom	INDEL	D16_PLUS	map_l100_m2_e0	homalt	76.4706	81.2500	72.2222	91.8552	13	3	13	5	2	40.0000
cchapple-custom	INDEL	D16_PLUS	map_l100_m2_e1	homalt	76.4706	81.2500	72.2222	91.8919	13	3	13	5	2	40.0000
cchapple-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.4409	97.7011	99.1919	60.2410	425	10	491	4	2	50.0000

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