PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
5601-5650 / 86044 show all
mlin-fermikitSNPtisegdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNPtisegdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitSNPtitech_badpromotershet
92.6829
86.3636
100.0000
41.5385
3863800
mlin-fermikitSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtvHG002compoundhethetalt
97.1360
94.4316
100.0000
20.8171
8144881400
mlin-fermikitSNPtvdecoy*
0.0000
100.0000
00000
mlin-fermikitSNPtvdecoyhet
0.0000
100.0000
00000
mlin-fermikitSNPtvdecoyhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvdecoyhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtvfunc_cdshet
99.1679
98.6827
99.6579
21.9982
262235262290
0.0000
mlin-fermikitSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
37.5000
1001000
mlin-fermikitSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.7857
1301300
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.5517
93.3333
100.0000
85.5670
1411400
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.0055
98.0306
100.0000
65.5504
8961889500
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.4286
30300
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.5517
93.3333
100.0000
85.5670
1411400
mlin-fermikitSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.1176
10100
mlin-fermikitSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_homopolymer_6to10het
98.8403
97.7490
99.9563
59.9965
6861158685630
0.0000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
mlin-fermikitSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
50.0000
50500
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_51to200het
74.6313
61.1111
95.8333
91.7241
22142310
0.0000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000