PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt % FP ma
5551-5600 / 86044 show all
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
85.7143
10100
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.2353
20200
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.6522
91.6667
100.0000
81.6667
1111100
mlin-fermikitSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
90.0000
10100
mlin-fermikitSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_6to10het
99.1067
98.2534
99.9750
43.4659
399471399210
0.0000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
75.0000
10100
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_triTR_11to50het
97.9878
96.2873
99.7494
25.8824
238692238860
0.0000
mlin-fermikitSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
mlin-fermikitSNPtilowcmp_SimpleRepeat_triTR_51to200*
93.3333
87.5000
100.0000
96.5174
71700
mlin-fermikitSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
94.7826
60600
mlin-fermikitSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
50.0000
100.0000
98.8372
11100
mlin-fermikitSNPtimap_l100_m0_e0hetalt
25.0000
14.2857
100.0000
80.0000
212200
mlin-fermikitSNPtimap_l100_m1_e0hetalt
55.0000
37.9310
100.0000
70.2703
11181100
mlin-fermikitSNPtimap_l100_m2_e0hetalt
57.1429
40.0000
100.0000
72.0930
12181200
mlin-fermikitSNPtimap_l100_m2_e1hetalt
59.0909
41.9355
100.0000
71.1111
13181300
mlin-fermikitSNPtimap_l125_m0_e0hetalt
0.0000
100.0000
08000
mlin-fermikitSNPtimap_l125_m1_e0hetalt
40.0000
25.0000
100.0000
68.4211
618600
mlin-fermikitSNPtimap_l125_m2_e0hetalt
40.0000
25.0000
100.0000
77.7778
618600
mlin-fermikitSNPtimap_l125_m2_e1hetalt
40.0000
25.0000
100.0000
78.5714
618600
mlin-fermikitSNPtimap_l150_m0_e0hetalt
0.0000
100.0000
03000
mlin-fermikitSNPtimap_l150_m1_e0hetalt
42.1053
26.6667
100.0000
66.6667
411400
mlin-fermikitSNPtimap_l150_m2_e0hetalt
42.1053
26.6667
100.0000
73.3333
411400
mlin-fermikitSNPtimap_l150_m2_e1hetalt
42.1053
26.6667
100.0000
75.0000
411400
mlin-fermikitSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitSNPtimap_l250_m1_e0hetalt
0.0000
100.0000
04000
mlin-fermikitSNPtimap_l250_m2_e0hetalt
0.0000
100.0000
05000
mlin-fermikitSNPtimap_l250_m2_e1hetalt
0.0000
100.0000
05000
mlin-fermikitSNPtimap_sirenhetalt
71.9101
56.1404
100.0000
66.6667
32253200
mlin-fermikitSNPtisegduphet
97.7090
96.7914
98.6442
84.9489
11644386116411600
0.0000
mlin-fermikitSNPtisegduphetalt
100.0000
100.0000
100.0000
96.7213
20200
mlin-fermikitSNPtisegdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNPtisegdupwithalthet
0.0000
100.0000
00000