PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
53701-53750 / 86044 show all | |||||||||||||||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m1_e0 | * | 60.8696 | 46.6667 | 87.5000 | 96.0784 | 7 | 8 | 7 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 98.9247 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m2_e0 | * | 61.5385 | 47.0588 | 88.8889 | 95.9641 | 8 | 9 | 8 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 99.0099 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m2_e1 | * | 59.2593 | 44.4444 | 88.8889 | 96.0352 | 8 | 10 | 8 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 99.0291 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l250_m1_e0 | * | 33.3333 | 25.0000 | 50.0000 | 98.3740 | 1 | 3 | 1 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l250_m1_e0 | homalt | 0.0000 | 0.0000 | 98.2456 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l250_m2_e0 | * | 50.0000 | 40.0000 | 66.6667 | 97.8102 | 2 | 3 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l250_m2_e0 | homalt | 66.6667 | 100.0000 | 50.0000 | 96.7213 | 1 | 0 | 1 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l250_m2_e1 | * | 50.0000 | 40.0000 | 66.6667 | 97.8723 | 2 | 3 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | map_l250_m2_e1 | homalt | 66.6667 | 100.0000 | 50.0000 | 96.7742 | 1 | 0 | 1 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | tech_badpromoters | * | 57.1429 | 50.0000 | 66.6667 | 40.0000 | 2 | 2 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D16_PLUS | tech_badpromoters | homalt | 0.0000 | 0.0000 | 66.6667 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 66.6667 | 63.6364 | 70.0000 | 99.4592 | 7 | 4 | 7 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 66.6667 | 100.0000 | 50.0000 | 99.2218 | 2 | 0 | 2 | 2 | 1 | 50.0000 | |
| ciseli-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 73.6842 | 70.0000 | 77.7778 | 99.4813 | 7 | 3 | 7 | 2 | 1 | 50.0000 | |
| ciseli-custom | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | homalt | 80.0000 | 100.0000 | 66.6667 | 99.3671 | 2 | 0 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D1_5 | map_l250_m0_e0 | het | 62.0843 | 60.6061 | 63.6364 | 98.5739 | 20 | 13 | 21 | 12 | 1 | 8.3333 | |
| ciseli-custom | INDEL | D1_5 | tech_badpromoters | homalt | 88.8889 | 88.8889 | 88.8889 | 50.0000 | 8 | 1 | 8 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D6_15 | decoy | * | 0.0000 | 0.0000 | 99.9010 | 0 | 1 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D6_15 | decoy | homalt | 0.0000 | 0.0000 | 99.6656 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D6_15 | func_cds | het | 84.7458 | 86.2069 | 83.3333 | 48.2759 | 25 | 4 | 25 | 5 | 1 | 20.0000 | |
| ciseli-custom | INDEL | D6_15 | func_cds | homalt | 91.6667 | 91.6667 | 91.6667 | 58.6207 | 11 | 1 | 11 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 66.6667 | 66.6667 | 66.6667 | 98.1132 | 2 | 1 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 80.0000 | 100.0000 | 66.6667 | 98.0263 | 2 | 0 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 97.0149 | 0 | 0 | 0 | 2 | 1 | 50.0000 | ||
| ciseli-custom | INDEL | D6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 94.1176 | 0 | 2 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 90.0000 | 0 | 1 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | D6_15 | map_l250_m2_e0 | het | 40.0000 | 35.7143 | 45.4545 | 98.1788 | 5 | 9 | 5 | 6 | 1 | 16.6667 | |
| ciseli-custom | INDEL | D6_15 | map_l250_m2_e0 | homalt | 83.3333 | 83.3333 | 83.3333 | 97.5000 | 5 | 1 | 5 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D6_15 | map_l250_m2_e1 | het | 38.4615 | 35.7143 | 41.6667 | 98.0645 | 5 | 9 | 5 | 7 | 1 | 14.2857 | |
| ciseli-custom | INDEL | D6_15 | map_l250_m2_e1 | homalt | 83.3333 | 83.3333 | 83.3333 | 97.5410 | 5 | 1 | 5 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | D6_15 | tech_badpromoters | het | 70.5882 | 60.0000 | 85.7143 | 58.8235 | 6 | 4 | 6 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | het | 28.5000 | 17.5926 | 75.0000 | 88.5167 | 19 | 89 | 18 | 6 | 1 | 16.6667 | |
| ciseli-custom | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | het | 18.7500 | 11.1111 | 60.0000 | 95.6522 | 3 | 24 | 3 | 2 | 1 | 50.0000 | |
| ciseli-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_6to10 | het | 12.1212 | 6.6667 | 66.6667 | 89.2857 | 1 | 14 | 2 | 1 | 1 | 100.0000 | |
| ciseli-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | * | 0.0000 | 0.0000 | 90.9091 | 0 | 4 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 0.0000 | 75.0000 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | I16_PLUS | map_l100_m0_e0 | * | 0.0000 | 0.0000 | 98.1132 | 0 | 11 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 92.8571 | 0 | 2 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | I16_PLUS | map_l100_m1_e0 | * | 6.6667 | 3.8462 | 25.0000 | 96.4602 | 1 | 25 | 1 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 25.0000 | 20.0000 | 33.3333 | 90.3226 | 1 | 4 | 1 | 2 | 1 | 50.0000 | |
| ciseli-custom | INDEL | I16_PLUS | map_l100_m2_e0 | * | 6.6667 | 3.8462 | 25.0000 | 97.0149 | 1 | 25 | 1 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | I16_PLUS | map_l100_m2_e0 | homalt | 25.0000 | 20.0000 | 33.3333 | 91.4286 | 1 | 4 | 1 | 2 | 1 | 50.0000 | |
| ciseli-custom | INDEL | I16_PLUS | map_l100_m2_e1 | * | 6.6667 | 3.8462 | 25.0000 | 97.1223 | 1 | 25 | 1 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | I16_PLUS | map_l100_m2_e1 | homalt | 25.0000 | 20.0000 | 33.3333 | 91.8919 | 1 | 4 | 1 | 2 | 1 | 50.0000 | |
| ciseli-custom | INDEL | I16_PLUS | map_l125_m1_e0 | * | 0.0000 | 0.0000 | 98.3607 | 0 | 15 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 95.4545 | 0 | 3 | 0 | 1 | 1 | 100.0000 | ||
| ciseli-custom | INDEL | I16_PLUS | map_l125_m2_e0 | * | 0.0000 | 0.0000 | 98.6301 | 0 | 15 | 0 | 1 | 1 | 100.0000 | ||