PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
4451-4500 / 86044 show all | |||||||||||||||
| raldana-dualsentieon | INDEL | * | map_l150_m0_e0 | homalt | 97.8462 | 96.9512 | 98.7578 | 89.5182 | 159 | 5 | 159 | 2 | 2 | 100.0000 | |
| raldana-dualsentieon | INDEL | * | map_l150_m1_e0 | * | 97.2191 | 96.5620 | 97.8852 | 87.7089 | 1292 | 46 | 1296 | 28 | 4 | 14.2857 | |
| raldana-dualsentieon | INDEL | * | map_l150_m1_e0 | het | 96.8336 | 96.3743 | 97.2973 | 87.9068 | 824 | 31 | 828 | 23 | 2 | 8.6957 | |
| raldana-dualsentieon | INDEL | * | map_l150_m1_e0 | hetalt | 92.3077 | 85.7143 | 100.0000 | 93.5943 | 18 | 3 | 18 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l150_m1_e0 | homalt | 98.1461 | 97.4026 | 98.9011 | 86.8269 | 450 | 12 | 450 | 5 | 2 | 40.0000 | |
| raldana-dualsentieon | INDEL | * | map_l150_m2_e0 | * | 97.3214 | 96.6619 | 97.9899 | 88.6072 | 1361 | 47 | 1365 | 28 | 4 | 14.2857 | |
| raldana-dualsentieon | INDEL | * | map_l150_m2_e0 | het | 96.9552 | 96.4680 | 97.4473 | 88.6581 | 874 | 32 | 878 | 23 | 2 | 8.6957 | |
| raldana-dualsentieon | INDEL | * | map_l150_m2_e0 | hetalt | 92.3077 | 85.7143 | 100.0000 | 94.3574 | 18 | 3 | 18 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l150_m2_e0 | homalt | 98.2199 | 97.5052 | 98.9451 | 88.0424 | 469 | 12 | 469 | 5 | 2 | 40.0000 | |
| raldana-dualsentieon | INDEL | * | map_l150_m2_e1 | * | 97.2377 | 96.5254 | 97.9606 | 88.6503 | 1389 | 50 | 1393 | 29 | 5 | 17.2414 | |
| raldana-dualsentieon | INDEL | * | map_l150_m2_e1 | het | 96.9025 | 96.3203 | 97.4918 | 88.7346 | 890 | 34 | 894 | 23 | 2 | 8.6957 | |
| raldana-dualsentieon | INDEL | * | map_l150_m2_e1 | hetalt | 90.4762 | 82.6087 | 100.0000 | 94.2424 | 19 | 4 | 19 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l150_m2_e1 | homalt | 98.1595 | 97.5610 | 98.7654 | 88.0266 | 480 | 12 | 480 | 6 | 3 | 50.0000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m0_e0 | * | 91.8239 | 93.5897 | 90.1235 | 97.0513 | 73 | 5 | 73 | 8 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m0_e0 | het | 89.0909 | 92.4528 | 85.9649 | 97.0235 | 49 | 4 | 49 | 8 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| raldana-dualsentieon | INDEL | * | map_l250_m0_e0 | homalt | 97.9592 | 96.0000 | 100.0000 | 96.8545 | 24 | 1 | 24 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l250_m1_e0 | * | 94.5813 | 94.4262 | 94.7368 | 94.7396 | 288 | 17 | 288 | 16 | 2 | 12.5000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m1_e0 | het | 93.2292 | 94.2105 | 92.2680 | 95.0218 | 179 | 11 | 179 | 15 | 1 | 6.6667 | |
| raldana-dualsentieon | INDEL | * | map_l250_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.0784 | 6 | 0 | 6 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l250_m1_e0 | homalt | 96.7136 | 94.4954 | 99.0385 | 93.9850 | 103 | 6 | 103 | 1 | 1 | 100.0000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m2_e0 | * | 95.0076 | 94.8640 | 95.1515 | 95.0798 | 314 | 17 | 314 | 16 | 2 | 12.5000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m2_e0 | het | 93.8679 | 94.7619 | 92.9907 | 95.2339 | 199 | 11 | 199 | 15 | 1 | 6.6667 | |
| raldana-dualsentieon | INDEL | * | map_l250_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.7391 | 6 | 0 | 6 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l250_m2_e0 | homalt | 96.8889 | 94.7826 | 99.0909 | 94.5893 | 109 | 6 | 109 | 1 | 1 | 100.0000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m2_e1 | * | 95.0376 | 94.8949 | 95.1807 | 95.1912 | 316 | 17 | 316 | 16 | 2 | 12.5000 | |
| raldana-dualsentieon | INDEL | * | map_l250_m2_e1 | het | 93.8967 | 94.7867 | 93.0233 | 95.3524 | 200 | 11 | 200 | 15 | 1 | 6.6667 | |
| raldana-dualsentieon | INDEL | * | map_l250_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.8421 | 6 | 0 | 6 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_l250_m2_e1 | homalt | 96.9163 | 94.8276 | 99.0991 | 94.6839 | 110 | 6 | 110 | 1 | 1 | 100.0000 | |
| raldana-dualsentieon | INDEL | * | map_siren | * | 98.6998 | 98.2726 | 99.1307 | 80.1633 | 7282 | 128 | 7298 | 64 | 16 | 25.0000 | |
| raldana-dualsentieon | INDEL | * | map_siren | het | 98.4968 | 98.0479 | 98.9497 | 80.0579 | 4420 | 88 | 4428 | 47 | 5 | 10.6383 | |
| raldana-dualsentieon | INDEL | * | map_siren | hetalt | 95.1168 | 90.6883 | 100.0000 | 85.1022 | 224 | 23 | 226 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | map_siren | homalt | 99.3604 | 99.3597 | 99.3611 | 79.7735 | 2638 | 17 | 2644 | 17 | 11 | 64.7059 | |
| raldana-dualsentieon | INDEL | * | segdup | * | 99.0001 | 98.7480 | 99.2534 | 93.8102 | 2524 | 32 | 2526 | 19 | 11 | 57.8947 | |
| raldana-dualsentieon | INDEL | * | segdup | het | 99.0763 | 98.7722 | 99.3823 | 94.1484 | 1448 | 18 | 1448 | 9 | 2 | 22.2222 | |
| raldana-dualsentieon | INDEL | * | segdup | hetalt | 96.0000 | 92.3077 | 100.0000 | 93.7787 | 120 | 10 | 122 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | segdup | homalt | 99.2731 | 99.5833 | 98.9648 | 93.2239 | 956 | 4 | 956 | 10 | 9 | 90.0000 | |
| raldana-dualsentieon | INDEL | * | segdupwithalt | * | 100.0000 | 100.0000 | 100.0000 | 99.9969 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | segdupwithalt | het | 100.0000 | 100.0000 | 100.0000 | 99.9951 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| raldana-dualsentieon | INDEL | * | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| raldana-dualsentieon | INDEL | * | tech_badpromoters | * | 97.2973 | 94.7368 | 100.0000 | 53.8462 | 72 | 4 | 72 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | tech_badpromoters | het | 94.5946 | 89.7436 | 100.0000 | 50.7042 | 35 | 4 | 35 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | tech_badpromoters | hetalt | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 4 | 0 | 4 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 57.1429 | 33 | 0 | 33 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | C16_PLUS | * | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | * | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | * | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | * | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| raldana-dualsentieon | INDEL | C16_PLUS | HG002complexvar | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||